Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4815 |
Symbol | |
ID | 5089443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5826735 |
End bp | 5828468 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644744238 |
Product | RagB/SusD domain-containing protein |
Protein accession | YP_001197133 |
Protein GI | 146302542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.202345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CAAATATAAA ATCAAGATTT CTGCTTCTAT TTGCTGTTGC TGCAACATCA ATGACCGCAG TAAGCTGTTC AGATTATCTT ACAGATGATC CTGCAGATAA ATTTACAAAC GATAACTTTT GGCAGTCAGA AGACAACGTA AAAACATTTT CGTGGGTAAA CTATGATACT TTTTACGGTT ATGGTAACGG AACAACAATC GGGCTTTCTT TTTTCTATTA TCATGGAAGT GATTACAGAG TAGATGATAA CTTGTCTGCC TTTACATTCT ATCAAATGCC GGTTACAGCC GCCACTACGA ATGTTTATTC ATGGAACAAG TACTACACGC TTATCCGCCG TTGTAACTTG ATGCTGGATA AAATCCCTAC GGTGCCAATG GCTCAGGAAA AAAAGAACCA CTATATTGGA GTTGCTAAAT TCTTTAGAGC TTACACCTAT TTCCGCTTAG TGCAAAAATT TGGTGATGTT CCTTACACAG ATAAATTTTT AGCTCAGGCA GATGCAGAAG TATATGCTCC CGCAAAACCA AGAGCTGAAA TTATGGATAA AGTAATTGCT GAATTACAAG AAGCAGCAGA CTTAATGCTT GCCGCAGATG ATAAAAACGT TACTGTTAAC AAATACACTG CTTATGCTGC TTTAAGCAAC GCCTGCCTGT ATGAAGGAAC ATATAGAAAA TATCATTTGG GACAAGATGG AAGTGTTTAT CTTAACAAAG CAAAAACAGC TTCGTTAGCG ATTATGAATA ATCCTTCATA TAAATTAAAT GCTGACTGGA AAGGACTTTA TAACTCAGTT GAATTACTTG GAAATACAGA AGTGATATTG GCTAAGCGTT ACTTAACAAA CGTATTAATG CATTCTCTTC AAAACTATAC TAATACCTCA ACTATTCAGT ACGGTTTAAC AAAATGGGCT GCAGACAGCT ATGTAACAAC AAACGGATTA CCAATTCAGC AGACTGGAAA CAGCCAGTTT ACAGGAGATG ATACTGCTGC AAAAACATTT GCTAACAGAG ATCCGCGTTT TGGTAAAACT GTAAATCCTG CAAATTATGG CTACAAAGGA AAACCTTTTG GCACAACAGC TTTAGTTTCA ATGTCTGGAT ATGTATTCGA ATTGTACAAC AATCCGGCAA CAACTGGTCC TGATGTTACA ACAGGAGGAC GTAACTATAC TGATGCACCA TTATTTACCT TAAGCGAAGT ATATTTAAAT TATGCTGAGG CTTGTGCCGA ATTAGGAACA GCTACAAACT CAGATCTTGA TTTGTCTATC AATAAAGTAC GTACTCGTGC CGGAATTGCA CCTTTAACTA CAGACGGAGT AAATGCTTCT GCCGGCGGTG TGCAAATTAA CGACCCAAGA AGAACTTCTT CTTTAGAGCA GCTTACAGGT GTTGTAAATC CATTAATCTG GGAAGTTCGT CGTGAGCGTC AAATCGAATT CATGAGCTGG ACAACTTTAA GACAAGCTGA TATTTACCGT TGGAAAAAAG GTGATTATTT AGATACTAAT AAAAACCCTG ATGTAAACTT AGGAGCAAGA ATTGGAACTC CTGTTGGATC ACAAACTGTG GTAGATGCAA ACGGATACGT AAAAATTTAT CCTGTCAGCA CCAGAACTTT TGAACCAAAG CATTATTTAA TGAATATCCC TACGAACGAT ATCGACTTAT ACAAAGCTCA GGGTGTAGAG TTAAAACAAA ACCCAGGCTG GTAA
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Protein sequence | MKKSNIKSRF LLLFAVAATS MTAVSCSDYL TDDPADKFTN DNFWQSEDNV KTFSWVNYDT FYGYGNGTTI GLSFFYYHGS DYRVDDNLSA FTFYQMPVTA ATTNVYSWNK YYTLIRRCNL MLDKIPTVPM AQEKKNHYIG VAKFFRAYTY FRLVQKFGDV PYTDKFLAQA DAEVYAPAKP RAEIMDKVIA ELQEAADLML AADDKNVTVN KYTAYAALSN ACLYEGTYRK YHLGQDGSVY LNKAKTASLA IMNNPSYKLN ADWKGLYNSV ELLGNTEVIL AKRYLTNVLM HSLQNYTNTS TIQYGLTKWA ADSYVTTNGL PIQQTGNSQF TGDDTAAKTF ANRDPRFGKT VNPANYGYKG KPFGTTALVS MSGYVFELYN NPATTGPDVT TGGRNYTDAP LFTLSEVYLN YAEACAELGT ATNSDLDLSI NKVRTRAGIA PLTTDGVNAS AGGVQINDPR RTSSLEQLTG VVNPLIWEVR RERQIEFMSW TTLRQADIYR WKKGDYLDTN KNPDVNLGAR IGTPVGSQTV VDANGYVKIY PVSTRTFEPK HYLMNIPTND IDLYKAQGVE LKQNPGW
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