| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4781 |
|---|
| Symbol | |
|---|
| ID | 5090108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5776025 |
|---|
| End bp | 5777239 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644744204 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_001197099 |
|---|
| Protein GI | 146302508 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.57507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAC ACAGAAATTT AGTTTATACT ACCATCGACT CTTTAAATGC TATTTTCAAT
GAAGGAGAAT ATGCAGATAA AGTGGTAGCC AGAGCATTAA AAAAAGACAA ACGTTGGGGA
AGTTCTGACA GGAAGTTTGT TGCTGAAACG ATATATGAGA TTGTTCGCTG GAAACGTTTA
TACGCAGAAA TTGCCGAAGT AAAAGAACCT TACGACAGAG ATAATTTATG GAGAATGTTC
GCGGTTTGGG CAGTTTTAAG AGGATATCCA ATTCCTGATT GGAGACAATT AGAAGGAACT
CCTGAAAGAA AAATCAAGGG ACGTTTTGAC GAGCTTTCGA AAGTTAGAGC TTTAAAGGAA
TCTATTCCGG ACTGGATGGA CGAATTGGGC GTAAAGGAAC TTGGAGAAAA AATCTGGTCA
AAAGAAATTA CGGCTCAAAA TCAGCCGGCT AAAGTTATTT TAAGAACAAA TACTCTTAAA
GGAACTAAAG AAAGTCTTAG AAATACTTTG ATGGATTTAA ACATTGAAAC AGAATATTTA
AAAGATCAGC CGGAAGCTTT AGTTTTAAAA GAAAGAGCAA ATGTATTTTT AACAGACGCT
TTTAAACAAG GACTTTTTGA GGTTCAGGAT GCTAACTCAC AATTAGTTGC CGGTTTCCTT
GATGTAAAAC CTGGAATGCG TGTTGTAGAT ACTTGTGCAG GAGCCGGAGG AAAAACATTA
CATATCGCTT CTTTAATGGA AAATAAAGGG CAGTTGATTG CAATGGATTT GTACGAAAGC
AAACTAAAAC AGTTAAAATT AAGAGCCAAA AGAAATGGTG CTTTTAATAT TGAATACCGT
ATTATTGACA CTACAAAAGT GATCAAAAAG CTGCATGAAA AAGCTGATCG TGTTTTAATC
GATGCGCCTT GCAGCGGATT AGGTGTTTTA AAAAGAAATC CTGATTCTAA ATGGAAATTA
CAGCCTGAAT TTATCGATAA CATTCGCAAA GTTCAAAGTG AAGTTTTAGA AAGCTATTCT
AAAATTGTAA AACCAGGAGG AAAATTAGTT TATGCAACTT GCTCTGTTTT ACCATCTGAA
AATCAGGAAC AAGTAGAAAA ATTCTTAAAA ACAGAAATAG GACAGCAGTT TACTTTTATT
GAAGATCGTA AATTACTGGC TTCAGAATCT GGCTTTGACG GATTTTATAT GGCACTTATG
GAAAGAAAAA AATAA
|
|---|
| Protein sequence | MRLHRNLVYT TIDSLNAIFN EGEYADKVVA RALKKDKRWG SSDRKFVAET IYEIVRWKRL
YAEIAEVKEP YDRDNLWRMF AVWAVLRGYP IPDWRQLEGT PERKIKGRFD ELSKVRALKE
SIPDWMDELG VKELGEKIWS KEITAQNQPA KVILRTNTLK GTKESLRNTL MDLNIETEYL
KDQPEALVLK ERANVFLTDA FKQGLFEVQD ANSQLVAGFL DVKPGMRVVD TCAGAGGKTL
HIASLMENKG QLIAMDLYES KLKQLKLRAK RNGAFNIEYR IIDTTKVIKK LHEKADRVLI
DAPCSGLGVL KRNPDSKWKL QPEFIDNIRK VQSEVLESYS KIVKPGGKLV YATCSVLPSE
NQEQVEKFLK TEIGQQFTFI EDRKLLASES GFDGFYMALM ERKK
|
|---|
| |