Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4711 |
Symbol | panB |
ID | 5092409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5687162 |
End bp | 5687980 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644744132 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001197029 |
Protein GI | 146302438 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAG CAAAAAAAGA TTATAAAAGA ATCACAACAA AGTCATTAAT TGAAATGAAA AGCAATGGAG AAAAAATCTC TATGCTTACG GCGTATGATT ACACAATGGC TAAAATTGTT GATACCGCAG GAGTCGATGT AATTTTGGTG GGAGATTCTG CTTCAAATGT TATGGCGGGC CATGAAACGA CTCTTCCAAT TACTTTAGAT CAAATGATTT ATCACGCTTC TTCTGTAGTT CGCGCTGTAG AGAGAGGTTT GGTTGTGGTT GATCTTCCTT TTGGAAGTTA CCAGTCAGAT CCTAAAGAGG CTTTGCGTTC TGCTATCAGA ATCATGAAAG AAAGCGGCGC CCACGCTGTG AAATTAGAAG GCGGAAAAGA AATTAAAGAA TCAATCAAAA AAATATTAAA CGCAGGAATT CCGGTTATGG GCCACTTAGG TTTAACGCCT CAGTCTATCT ATAAATTTGG AACTTACAGC GTTCGTGCAA AAGAAGAACA AGAAGCTGAA AAACTTATTG AAGATGCTCA AATGCTTGAA AAAGTAGGAT GTTTTGGAGT TGTTCTTGAA AAAATCCCAG CTGATTTAGC TAAAAAAGTA GCCGATAGTA TTTCAATCCC AGTTATCGGA ATTGGTGCCG GCGGTGCGGT AGACGGACAA GTTTTAGTTA TTCACGATAT GTTAGGAATG AATAATGAAT TCAGCCCGCG TTTCTTACGC CGTTACTTAA ACTTATACGA AGAAATGACT AAAGCAATTG GTCAATATGC TGCTGATGTA AAATCAAGCG ATTTCCCTAA TGCTAGTGAG CAATATTAA
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Protein sequence | MSTAKKDYKR ITTKSLIEMK SNGEKISMLT AYDYTMAKIV DTAGVDVILV GDSASNVMAG HETTLPITLD QMIYHASSVV RAVERGLVVV DLPFGSYQSD PKEALRSAIR IMKESGAHAV KLEGGKEIKE SIKKILNAGI PVMGHLGLTP QSIYKFGTYS VRAKEEQEAE KLIEDAQMLE KVGCFGVVLE KIPADLAKKV ADSISIPVIG IGAGGAVDGQ VLVIHDMLGM NNEFSPRFLR RYLNLYEEMT KAIGQYAADV KSSDFPNASE QY
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