Gene Fjoh_4700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4700 
Symbol 
ID5092398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5676665 
End bp5677789 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content35% 
IMG OID644744121 
Product6-phosphogluconolactonase 
Protein accessionYP_001197018 
Protein GI146302427 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.891407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA AAATAAACTT CTTACTGCTA ATCTTTTTAC TAACATTTAA TGCTTTCTCG 
CAAAACACTT ATGTCTTTTT GGGATCGTAT AACCGCGATA AAACTGCAGA AGCGATCCAG
ATATATCAAT TGGATACATT AAATGGAAAA CTTACGAAAG TAACGGCTGC AAAAAACATT
ATAAATCCGT CTTATTTAAC GATTTCTCCA AACGGAAAAT ATGTGTATGC CTGTACAGAT
ACTAAAACAC CAAATGCAGG AAGCGTGAGC AGTTTTGAGT TTAATCCCGA CAATAAAACA
CTGACATTTT TAAACAGCCA GAGAAGCGGC GGAGAAAATC CGGTATATGT AAGCGTTCAC
AAAAGCGGTA AATGGCTGGC AAATGCAAAT TATACAGAAG GAAGCGTTTC GGTTTATCCT
CTTTTAGAAA ATGGAAAAAT AGATTCAATT GCGCAGAACT TTCAATATAC AGACGGAAGC
GTAAACAAAG ACAGACAGAC AAGATCTCAC GTACATTCGG CAGTATTTTC TCCGCAATGC
GATTATTTGT TTTTACCCGA TTTAGGTGCA GATAAAATTC GTTGTTATGC CTTTGATGCT
TCTCAGAAAA AACCTTTAAT CGAAACCCAA AACCCGTTTA CAAAAACAGA TTTAGAAGCC
GGACCAAGGC ATTTTACTTT TCATCCTAAT CAAAAATGGG GTTATTGTAT TGAAGAAATG
GCTGGGCAGA TAAGTGTGTA TAATTATGAT AATGGCGTTT TAAATAAAAT ACAGCGTATT
GCTTCACATC CAGATAAAAT AAAAGAAGGT TTTGAAAGTT CGGACATTCA TATTTCTCCA
GATGGAAAAT TTCTGTATGC CACAAATCGT GGAAAAGAAA ACAATATTGC TATTTTCTCT
ATTGACGAAA ATGGACTGCT AAAAAACATT GGTTACCAGT CTACTTTAGG AAAACATCCT
AGAATTTTTG CAATAGACGA AAGCGGAAAA TTTTTGGCTG CATCGAATGT GCTTACCGGA
AATGTAATTG TTTTTAAAAG AGATTTGAAA ACCGGTTTAT TGAAAAAAAC AGGAAAACAG
ATTAAAATGG AGAATGTTTC ATGCGTTCAG ATCAAAAAGA TTTAG
 
Protein sequence
MKTKINFLLL IFLLTFNAFS QNTYVFLGSY NRDKTAEAIQ IYQLDTLNGK LTKVTAAKNI 
INPSYLTISP NGKYVYACTD TKTPNAGSVS SFEFNPDNKT LTFLNSQRSG GENPVYVSVH
KSGKWLANAN YTEGSVSVYP LLENGKIDSI AQNFQYTDGS VNKDRQTRSH VHSAVFSPQC
DYLFLPDLGA DKIRCYAFDA SQKKPLIETQ NPFTKTDLEA GPRHFTFHPN QKWGYCIEEM
AGQISVYNYD NGVLNKIQRI ASHPDKIKEG FESSDIHISP DGKFLYATNR GKENNIAIFS
IDENGLLKNI GYQSTLGKHP RIFAIDESGK FLAASNVLTG NVIVFKRDLK TGLLKKTGKQ
IKMENVSCVQ IKKI