| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4667 |
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| Symbol | truA |
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| ID | 5094121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5643692 |
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| End bp | 5644546 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644744088 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001196985 |
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| Protein GI | 146302394 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGTT TTTACAACAT CCCTAAAAAG AAAACTTTGA ACCTCTGTCC CTTTGAACCT
TTGAACCTCA AAAAGAAAAA ATCTTTGTAC CTTTGCACCT CAAAACCTCT GTACCTCACA
ATGAGATATT TTATTCATTT TGCTTATAAC GGAACTCATT ATCATGGCTG GCAGTTTCAG
CCAAATGCTT CTTCAGTTCA GGAAACTTTA AATAAAGCGC TTTCGGTTTT ATTAAATTCA
ACCATAAATG TTATGGGCGC CGGAAGAACA GATACTGGGG TGCATGCCGA GGAAATGTAC
GGACATTTTG ATTTAGAAAA ATCTATTGAT ATTCCGGTTT TGGTTCATAA ACTCAATTCG
TATTTACCAA AAGATATTGC GGTTTACAAC CTGATTCCGG TACATGATGA TGCGCATTGT
AGATTTGACG CAACAAAAAG AACATACGAA TATCATATCA ATACAGTTAA AAATCCGTTT
TTAGAAGAAT TGAGCTGGTA CGTGACTCAA AAGCTCGATG TTGAGTTAAT GAATGAGGCT
GCAAAGATAT TATTGAAGCA TACCGATTTT CAGTGTTTCT CAAAAGTAAA TACAGATGTT
AATACTTTTG ACTGCACGAT TTTTGAGGCC TATTGGAAAC AGGAAAATAA CAAACTGGTT
TTTACAATTT CGGCAAACCG TTTTTTACGA AACATGGTTC GGGCAATTGT GGGAACTTTA
ATTAATATAG GATTACACAA AATCACGCTG GCAGATTTTG AAAATATTAT TGCCAGCAAA
AACAGAGAAA AAGCCGGATT TTCGGTTCCG GCGCATGGTT TGTATTTAAC CAAAATTTAT
TACGATTATT TATAA
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| Protein sequence | MRRFYNIPKK KTLNLCPFEP LNLKKKKSLY LCTSKPLYLT MRYFIHFAYN GTHYHGWQFQ
PNASSVQETL NKALSVLLNS TINVMGAGRT DTGVHAEEMY GHFDLEKSID IPVLVHKLNS
YLPKDIAVYN LIPVHDDAHC RFDATKRTYE YHINTVKNPF LEELSWYVTQ KLDVELMNEA
AKILLKHTDF QCFSKVNTDV NTFDCTIFEA YWKQENNKLV FTISANRFLR NMVRAIVGTL
INIGLHKITL ADFENIIASK NREKAGFSVP AHGLYLTKIY YDYL
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