Gene Fjoh_4625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4625 
Symbol 
ID5094079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp5590977 
End bp5591354 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content39% 
IMG OID644744046 
Productnitrite reductase (NAD(P)H), small subunit 
Protein accessionYP_001196943 
Protein GI146302352 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.817251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA TCTTAAATCA ATACGAAACA GTTCATGCGA GCGATGCTAC AATTTGGTTC 
AAAGCAGGTA AAGTAGAAGA TTTCCCGACC AACCGAGGCG GATGCATTAA ATACAAAAAC 
AAACAAATCG CCATTTTCAA TTTTACACGC AGAAATGAAT GGTACGCTTG CCAAAACGCC 
TGTCCGCATA AAATGGAAAT GGTACTTTCA AGAGGAATGA CAGGTTCTGC CGATGATATC 
CCGAAAATCG CCTGTCCGAT GCATAAAAAG ACTTTCTCCT TAGTTGACGG TTCAAACCTA 
AACGGAGACG ATTTTAAAAT TGCCACCTAT CCAATTAAAG TAGTTGAAAA TGAAGTTTTT 
GTTGGATTTG CAGACTAA
 
Protein sequence
MEEILNQYET VHASDATIWF KAGKVEDFPT NRGGCIKYKN KQIAIFNFTR RNEWYACQNA 
CPHKMEMVLS RGMTGSADDI PKIACPMHKK TFSLVDGSNL NGDDFKIATY PIKVVENEVF 
VGFAD