Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4613 |
Symbol | |
ID | 5092924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5577728 |
End bp | 5578489 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644744034 |
Product | NLP/P60 protein |
Protein accession | YP_001196931 |
Protein GI | 146302340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000101547 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGGAA TTTGTAATCT AGCCATAGTA CCCGTTCGAG CTGAAGCCAG CGACAGAAGT GAAATTGTTA CACAGCTCTT GTTTGGCGAG CATATCGAAA TTTTAGAACG TCATAATCAA TGGGCGCGAA TCAGAATTCA ATATGATGAT TACGAAGGCT GGGTAGATTC TAAGCAATAT CAGGTAATTT CAAAAGAGCA GTTCGATTTG TTGAGCAAAG AAGCCATTAT TCTAAATGCT GATTTAATTG ACTACATCAC TGCACCAAAC AATCTATTGC TTCCAATTCC GCTTGGAGCT TCTTTATCTT TTTTAAACAA TAACGAAATC AATACTTCAA ATTTTGATTT TGAAGGAACC AAAACCAGCG GCGTAAAACC TAAAAGTGCA TTAATCAAAA CTGCTTTTAT GTATTTGAAT GCTCCCTATT TATGGGGCGG AAAAACTCCT TTTGGCATTG ATTGTTCAGG CTTTACCCAA ATGGTTTATA AATTGAATGG CTATAAAATT CATCGTGATG CTTCTCAGCA GGCACTTGAA GGCGAAGCTT TAAGTTTTAT CGAAGAAAGT GAAGTTGGCG ATTTAGCCTT TTTTGATAAC GACGAAGGCA ATATCATTCA TGTCGGCATC ATTATGGAAA ACAATTACAT CATTCACGCA AGTGGAAAAG TCCGCATTGA CCGCTTGGAT CATTTAGGAA TTTACAATCC TGAACTAAAA AAACACACTC ACAAACTGCG TGTTATCAAA AAAATCATAT AA
|
Protein sequence | MFGICNLAIV PVRAEASDRS EIVTQLLFGE HIEILERHNQ WARIRIQYDD YEGWVDSKQY QVISKEQFDL LSKEAIILNA DLIDYITAPN NLLLPIPLGA SLSFLNNNEI NTSNFDFEGT KTSGVKPKSA LIKTAFMYLN APYLWGGKTP FGIDCSGFTQ MVYKLNGYKI HRDASQQALE GEALSFIEES EVGDLAFFDN DEGNIIHVGI IMENNYIIHA SGKVRIDRLD HLGIYNPELK KHTHKLRVIK KII
|
| |