Gene Fjoh_4594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4594 
Symbol 
ID5092905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5557900 
End bp5558607 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content34% 
IMG OID644744012 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001196912 
Protein GI146302321 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.246782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAT TTTACAATCC GGATATAGAC GAAACAACCG AAAGTTTTTC TTTTGATAAA 
GAAGAAAGCA AACACATTAT AAAAGTTTTA CGCAAGAAAG ATTCAGATAT TCTTCACGTT
ACAAATGGTC AGGGATTATT GTTTGAAACC GAAATTACGC TGGCATCTGA TAACAAATGT
ATCGTGAGCG TTCTTTCAAT AAAAAAATCT CCAGAACCAA AATTTCGTCT GCACCTTGCT
GTTGCGCCTA CTAAAATGAA TGACCGTTTT GAGTGGTTTT TAGAAAAAGC TACAGAAATA
GGCATTCAGG AAATTACACC AATTATCTGC GATCGTTCTG AAAGAAAAGT GATTAATTTA
GAGCGTTTTG AAAAAATAGT TTTATCGGCA ATGAAACAAT CTAATGAAAT GTTTCTTCCA
AAATTAAACG ATGCTGTTTC GTTTAAAGAA TTTATCAAGC AAAAAAATCA AGGCTTGCAG
TTTATTGCGC ACTGCGAAGA AACCGATAAA AAATCTTTGA AAGAATCTTT AAAATCAAAC
GAAAACGTAA CCTTATTAAT TGGTCCCGAA GGTGATTTTT CTGAAAAAGA AATTGCATTG
GCTCTTGAAA ACAACTATAA ACCGGTAACA TTAGGAAATA CTCGTCTGCG TACAGAAACT
GCCGCAGTTG TGGCCTGCCA TAGTGTTGTA TTTTTTAATG AAGTTTAA
 
Protein sequence
MQLFYNPDID ETTESFSFDK EESKHIIKVL RKKDSDILHV TNGQGLLFET EITLASDNKC 
IVSVLSIKKS PEPKFRLHLA VAPTKMNDRF EWFLEKATEI GIQEITPIIC DRSERKVINL
ERFEKIVLSA MKQSNEMFLP KLNDAVSFKE FIKQKNQGLQ FIAHCEETDK KSLKESLKSN
ENVTLLIGPE GDFSEKEIAL ALENNYKPVT LGNTRLRTET AAVVACHSVV FFNEV