Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4594 |
Symbol | |
ID | 5092905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5557900 |
End bp | 5558607 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644744012 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001196912 |
Protein GI | 146302321 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.246782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTAT TTTACAATCC GGATATAGAC GAAACAACCG AAAGTTTTTC TTTTGATAAA GAAGAAAGCA AACACATTAT AAAAGTTTTA CGCAAGAAAG ATTCAGATAT TCTTCACGTT ACAAATGGTC AGGGATTATT GTTTGAAACC GAAATTACGC TGGCATCTGA TAACAAATGT ATCGTGAGCG TTCTTTCAAT AAAAAAATCT CCAGAACCAA AATTTCGTCT GCACCTTGCT GTTGCGCCTA CTAAAATGAA TGACCGTTTT GAGTGGTTTT TAGAAAAAGC TACAGAAATA GGCATTCAGG AAATTACACC AATTATCTGC GATCGTTCTG AAAGAAAAGT GATTAATTTA GAGCGTTTTG AAAAAATAGT TTTATCGGCA ATGAAACAAT CTAATGAAAT GTTTCTTCCA AAATTAAACG ATGCTGTTTC GTTTAAAGAA TTTATCAAGC AAAAAAATCA AGGCTTGCAG TTTATTGCGC ACTGCGAAGA AACCGATAAA AAATCTTTGA AAGAATCTTT AAAATCAAAC GAAAACGTAA CCTTATTAAT TGGTCCCGAA GGTGATTTTT CTGAAAAAGA AATTGCATTG GCTCTTGAAA ACAACTATAA ACCGGTAACA TTAGGAAATA CTCGTCTGCG TACAGAAACT GCCGCAGTTG TGGCCTGCCA TAGTGTTGTA TTTTTTAATG AAGTTTAA
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Protein sequence | MQLFYNPDID ETTESFSFDK EESKHIIKVL RKKDSDILHV TNGQGLLFET EITLASDNKC IVSVLSIKKS PEPKFRLHLA VAPTKMNDRF EWFLEKATEI GIQEITPIIC DRSERKVINL ERFEKIVLSA MKQSNEMFLP KLNDAVSFKE FIKQKNQGLQ FIAHCEETDK KSLKESLKSN ENVTLLIGPE GDFSEKEIAL ALENNYKPVT LGNTRLRTET AAVVACHSVV FFNEV
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