Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4585 |
Symbol | |
ID | 5092896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5544103 |
End bp | 5545224 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644744003 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001196903 |
Protein GI | 146302312 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGGTT TAAACAAAAT TAAGGTAATC TTTACTTTTT TTCTAACGAT ATTGTCATTT TGCTCTTATA GTCAATCAAA TGTTTTTAAA GTAACACTTG ATGCCGGACA CGGAGATCAT GACTTTGGTG CTGTTTACAG CGGCCGGATT GAAAAAAATA TTGCCTTAGC AATTGTTTTA AAAGTGGGGA AAATTTTAGA GCTTAATCCA AATGTTAATG TAATTTATAC TCGTAAAACA GATGTTTTCG TGGATTTGGT CGAAAGAGCT AATATTGCCA ACAGAGCAAA TTCAAATATT TTTGTTTCTA TTCACTGTAA TGCTAACAAA AATACAGCTG CAGACGGAAC CGAAACTTAT GTAATGGGTT TGAGTAAAGT TGCCTCGAAT CTTGAAGCAG CAAAAAAAGA GAACTCTGTA ATTACTTTAG AAAAAGATTA TAAACGAAAA TATGAAGGTT TCGACCCAAA TTCGCCAGAA TCTATGATCG GAATGACTTT GATGCAGGAA GAATATTTAG ACAATAGTAT TTCTCTGGCA ACTAAAATCG AAGATAATTT TGAAAAATTA GGTAAAAAAC TTCGTCAGGG AGGTGTAAAA CAAGCACCTT TCATGGTACT TCACAAAGCA TACATGCCAA GAGTTTTAGT AGAAACGGGA TTTGTCTCTA ATCCAACAGA AGGTAATATT TTAAATTCTG AAGAAGGTCA GGATGATATA GCAAAAGCTA TTGCAGAAGC AATTCTGAGC TATAAAAGAG AGTACTTTGG TTCAGGGGGC GAGTCAGACG ATAGTCGGCC CATAAGAGAT ACTACTCCCG CAAAACCAAA AACAACTGCT CCGGCTGCAG TAACTAAAAA TGCACCAAAA GGAACGTTTT TCAAAGTACA GCTAATCGCA AGTATTAAAA AAACACCATT GGAGCCAAAA AACTTTAAAG GACTAAAAAA TGTAACTATG TTATTTGAAA ACAATATATA TAAGTACTTC TATCAGGAAA CTTCAGATTA TGAAACTGCA AAGAAATATC TGGAAGAGGC TAAAAGTAAA GGGTATGGCG CTTCCTTTTT AGTTGCAACC AAAGACGGAG AAAAGATTAG TATTCAGGAC GCGATCAAAT AA
|
Protein sequence | MNGLNKIKVI FTFFLTILSF CSYSQSNVFK VTLDAGHGDH DFGAVYSGRI EKNIALAIVL KVGKILELNP NVNVIYTRKT DVFVDLVERA NIANRANSNI FVSIHCNANK NTAADGTETY VMGLSKVASN LEAAKKENSV ITLEKDYKRK YEGFDPNSPE SMIGMTLMQE EYLDNSISLA TKIEDNFEKL GKKLRQGGVK QAPFMVLHKA YMPRVLVETG FVSNPTEGNI LNSEEGQDDI AKAIAEAILS YKREYFGSGG ESDDSRPIRD TTPAKPKTTA PAAVTKNAPK GTFFKVQLIA SIKKTPLEPK NFKGLKNVTM LFENNIYKYF YQETSDYETA KKYLEEAKSK GYGASFLVAT KDGEKISIQD AIK
|
| |