Gene Fjoh_4585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4585 
Symbol 
ID5092896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5544103 
End bp5545224 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content34% 
IMG OID644744003 
Productcell wall hydrolase/autolysin 
Protein accessionYP_001196903 
Protein GI146302312 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGTT TAAACAAAAT TAAGGTAATC TTTACTTTTT TTCTAACGAT ATTGTCATTT 
TGCTCTTATA GTCAATCAAA TGTTTTTAAA GTAACACTTG ATGCCGGACA CGGAGATCAT
GACTTTGGTG CTGTTTACAG CGGCCGGATT GAAAAAAATA TTGCCTTAGC AATTGTTTTA
AAAGTGGGGA AAATTTTAGA GCTTAATCCA AATGTTAATG TAATTTATAC TCGTAAAACA
GATGTTTTCG TGGATTTGGT CGAAAGAGCT AATATTGCCA ACAGAGCAAA TTCAAATATT
TTTGTTTCTA TTCACTGTAA TGCTAACAAA AATACAGCTG CAGACGGAAC CGAAACTTAT
GTAATGGGTT TGAGTAAAGT TGCCTCGAAT CTTGAAGCAG CAAAAAAAGA GAACTCTGTA
ATTACTTTAG AAAAAGATTA TAAACGAAAA TATGAAGGTT TCGACCCAAA TTCGCCAGAA
TCTATGATCG GAATGACTTT GATGCAGGAA GAATATTTAG ACAATAGTAT TTCTCTGGCA
ACTAAAATCG AAGATAATTT TGAAAAATTA GGTAAAAAAC TTCGTCAGGG AGGTGTAAAA
CAAGCACCTT TCATGGTACT TCACAAAGCA TACATGCCAA GAGTTTTAGT AGAAACGGGA
TTTGTCTCTA ATCCAACAGA AGGTAATATT TTAAATTCTG AAGAAGGTCA GGATGATATA
GCAAAAGCTA TTGCAGAAGC AATTCTGAGC TATAAAAGAG AGTACTTTGG TTCAGGGGGC
GAGTCAGACG ATAGTCGGCC CATAAGAGAT ACTACTCCCG CAAAACCAAA AACAACTGCT
CCGGCTGCAG TAACTAAAAA TGCACCAAAA GGAACGTTTT TCAAAGTACA GCTAATCGCA
AGTATTAAAA AAACACCATT GGAGCCAAAA AACTTTAAAG GACTAAAAAA TGTAACTATG
TTATTTGAAA ACAATATATA TAAGTACTTC TATCAGGAAA CTTCAGATTA TGAAACTGCA
AAGAAATATC TGGAAGAGGC TAAAAGTAAA GGGTATGGCG CTTCCTTTTT AGTTGCAACC
AAAGACGGAG AAAAGATTAG TATTCAGGAC GCGATCAAAT AA
 
Protein sequence
MNGLNKIKVI FTFFLTILSF CSYSQSNVFK VTLDAGHGDH DFGAVYSGRI EKNIALAIVL 
KVGKILELNP NVNVIYTRKT DVFVDLVERA NIANRANSNI FVSIHCNANK NTAADGTETY
VMGLSKVASN LEAAKKENSV ITLEKDYKRK YEGFDPNSPE SMIGMTLMQE EYLDNSISLA
TKIEDNFEKL GKKLRQGGVK QAPFMVLHKA YMPRVLVETG FVSNPTEGNI LNSEEGQDDI
AKAIAEAILS YKREYFGSGG ESDDSRPIRD TTPAKPKTTA PAAVTKNAPK GTFFKVQLIA
SIKKTPLEPK NFKGLKNVTM LFENNIYKYF YQETSDYETA KKYLEEAKSK GYGASFLVAT
KDGEKISIQD AIK