Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4574 |
Symbol | |
ID | 5092885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5531924 |
End bp | 5534113 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644743992 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001196892 |
Protein GI | 146302301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.543152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCACA TACGGATTTT TTTATTTACA CTGCTATTTC TGAATTGTTT CAGCAATTTT GCCGTAGCAC AATCTGAACC GGTTTCAGAA GCCCGGATAA ACAGATTAAT TAAGGAGGCC TGGGATGATT TTAAAGACTC CAATTTCGAA AGATCTCTCA TTACTTCACG TGTAGCATTA AATTATGCCA CAGCAGCAAA AAATGATAAT TTAATTGCAA AGGCATACAA AGTTATTGCC GGAAATTATA ACGAATTATC AGAAATTGAT AAAGCTCTTT TCTTTTACAA TAAAGGTTTA TACTACGCAA ATAAAACAGA CAACGATTCG TTAAAGTACA GTCTTCACAA CAATATAGGA AACATTTATT GTTTCGAAAA AAAGCAGTTT GATAAAGGGA TAGATTATTA CCAAAAATCA ATTGCTTACA GTTTAAAAAC AAACAACAGC GATCAGATTT ATTTTACCAA TGTCAATATT GCCTGGGCTT ATTTTGATAT TGGAAGATTT GATGCAGGAT ATCCGTACTT AAAATTTGTT GGCGATCATG TTGAAAAATA CGGAGATGCT TCCACAGAAA TTATTGTGTA TATGCTGAAT GGAATGTATT CTAGTTACAA AAACGAAAAT ACAGCCGCTA ATTCTTATTT TTTAAAAGCA ATTGCCGCCG GAGAAAACAG CGATGAAAAA TCGGATTTGT CTTATACACA TTTAGAATAT TCAAAATTCT TAACCAAAAT AAAGAATTAT AAAGAGGCTT ATAAGCATCT TGTAAAGTTT AATGAAATTA CAGAGGAACT TTATAATCAG GAAAAATTAA AAAAAGCATC AATTGCCGGA TTCAATTTAG AGCTGGATGA ATATAAAAGA CAGATTGACA AAATTGAAAA TGAAAAAACA TCACAGTCTC AAAGTCTTAA AAAATCAAGA ATTATCGTAA TCCTGTTTAT ACTCACATCT CTAATCTTAC TTTTTTTAAT TGTAACGCTG ATTAAGAATA TAGGATTTAA GAAAAAACAC AATTTAGAGC TCTTAGAGGC AAAAGAAATT GCAGAAGAAG CCTCATTACT CAAAACCCAA TTTATTTCGA CTATAAGCCA CGAATTGCGT ACACCACTGT ATGGTGTGGT AGGAATAACA AATATGCTTC TTGAAGAACA CAAAGAATTA TCGCAGAGCC AGCATTTAAG TGCTTTAAAA TTTTCGGCAC GATATTTACT TTCCTTAGTT AACGATATTC TTCAAATTAA TAAAATTGAA GAAAACAAAG TAGTTTTAGA AAGCTTGACA TTTAATATTT CGGATGAAAT AACAATGATC AAAAATTCAC TTTCTTTTCT ATCCCAAAAA AATAATAACA AAATTAATGT TGAAATAGAC GATTATATTC CGGAGTATTT AATTGGTGAT AAACTTCGAC TGGGTCAGAT TTTAATGAAT TTAGTGAGCA ATGCGCTAAA GTTTACAAAA AACGGGGAAG TTGATATTAT CGTTAAACTA CATAAGATAG AAGGGAAATT ATACTATCTG GATTTTTTGA TAAGAGATAA CGGAGTTGGA ATTGCGGCTG TAGATCAAAA TAAAATATTC GAAAAATTCG TTCAGGTAGG ACGAAAAGAT GAAGATTATC AGGGAACGGG ATTAGGTTTA AGTATAGTAA AACGATTATT GGGGCTTTTT GGAAGTACAA TTACGCTGGA AAGTGATTTA GGTGCAGGAA CTGCATTTTC ATTTGTAATT CCGTTTGAAC ATGATCCTCA AAAAACAAAA AAAATAATTG AAGATATAGA GGTGGATTTA ACATCAAGCG AAATTTATAA AATTCTTATT GTAGAAGATA ATCTAATTAA CCAGCTGGTT ACTAAAAAGA TTATCGAAAA AAATAATTTT GTCTGCAAAG TCGTTGATGA CGGTTTTGGA GCGCTTACAA TATTAGAGAA AGAAAGATTT GATCTTATTT TAATGGATAT TAATATGCCG TTAATGAATG GTTTTGAAGC TACAAAACGC ATTCGGCTGT TAGGGGTAAA AACGCCTATA GTGGCGTTGA CTGCTTTTGA TAAAGACGAA ATTACAGATG AGGCACTTTC ATCAGGAATG AATGATATTA TTGTAAAGCC TTTTGAGCCT GTAAAATTGT TTAAGATTAT AAATTACTTA ATAATAGAAG CGAAAAACGC TGGTTTTTAA
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Protein sequence | MPHIRIFLFT LLFLNCFSNF AVAQSEPVSE ARINRLIKEA WDDFKDSNFE RSLITSRVAL NYATAAKNDN LIAKAYKVIA GNYNELSEID KALFFYNKGL YYANKTDNDS LKYSLHNNIG NIYCFEKKQF DKGIDYYQKS IAYSLKTNNS DQIYFTNVNI AWAYFDIGRF DAGYPYLKFV GDHVEKYGDA STEIIVYMLN GMYSSYKNEN TAANSYFLKA IAAGENSDEK SDLSYTHLEY SKFLTKIKNY KEAYKHLVKF NEITEELYNQ EKLKKASIAG FNLELDEYKR QIDKIENEKT SQSQSLKKSR IIVILFILTS LILLFLIVTL IKNIGFKKKH NLELLEAKEI AEEASLLKTQ FISTISHELR TPLYGVVGIT NMLLEEHKEL SQSQHLSALK FSARYLLSLV NDILQINKIE ENKVVLESLT FNISDEITMI KNSLSFLSQK NNNKINVEID DYIPEYLIGD KLRLGQILMN LVSNALKFTK NGEVDIIVKL HKIEGKLYYL DFLIRDNGVG IAAVDQNKIF EKFVQVGRKD EDYQGTGLGL SIVKRLLGLF GSTITLESDL GAGTAFSFVI PFEHDPQKTK KIIEDIEVDL TSSEIYKILI VEDNLINQLV TKKIIEKNNF VCKVVDDGFG ALTILEKERF DLILMDINMP LMNGFEATKR IRLLGVKTPI VALTAFDKDE ITDEALSSGM NDIIVKPFEP VKLFKIINYL IIEAKNAGF
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