Gene Fjoh_4556 details

Gene Information

• Locus tag: Fjoh_4556
• ID: 5092629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 5504408
• End bp: 5506474
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644743973
• Product: Beta-N-acetylhexosaminidase
• Protein accession: YP_001196874
• Protein GI: 146302283
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3525] N-acetyl-beta-hexosaminidase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATC TATTTGTACT ACTATTAGCA GGTGTAACGG CAAATGCTCA AATGCAAAAA 
GAACAGCTGA ACCTTATGCC CTGGCCTCAA AATGTTGTCG TAAACGACGG AAATTTTACA 
TTAACTAAAA ACTTTAAAGT AAATATTTCT GGAAATCCTG ATTCAAGGAT TTTTGGAGGA 
GTAACTCGTT TTTTACGCCG ATTAGATGGT AGAACAGGTA TTTTTTTTGA ACAAGGTTTT 
ATTACCAAAC TTAATGAGTT TCCAAATGCA GAATTACAGA TTAACTGTAC TAAAAATGGA 
AAAATAGGTT TATATGAAGA TGAAAGCTAC AGCTTAGATG TTAAAGCAAA CAAAATTACA 
ATTAATGCAA CCAGCGATTT AGGAGCTTTA CATGGACTGG AAACGTTATT GCAGCTGCTT 
CAAAACGACA GCAAAAAATT CTATTTCCCT GTTTCTCAAA TCTCAGACTT TCCAAGATTT 
ACCTGGAGAG GTTTAATGCT TGATGCTTCG AGACATTTTC AGCCGGTAGA TGTAGTGAAA 
AGAAATCTGG ATGCATTGGC AGCAATGAAA ATGAATGTTT TCCACTGGCA TTTAGTAGAC 
GATCAAGGCT GGAGAATTGA AACTAAAAAA CATCCAAAAC TAATAGAACT GGCTTCGGAT 
GGATTATATT ACACACAAGA GGAAATTAGA AATATCGTAA AATATGCCGA TGAGCGCGGT 
ATTTTAATTG TTCCGGAAAT AGACGTTCCG GGTCATGGAT CTGCAATACT TACTGCTTAC 
CCTGAAATTG GAAGCAAAGT GATTACATTG ACCGGAGGAA CTTCTGAAAA AAATATTCAA 
GGTACGGCAA TCTCTACCTA TAGAATTGAA AGAAATGCAG GTATATTTTC GCCTACATTA 
GATCCTTCAA ATCCTAAAAC GTATAAAATA TTAAGTGAAC TTTTTGATGA GGTATGCCCG 
TTATTTCCCG GAGCTTATTT TCACATTGGG GGTGACGAAA ATGAAGGGAA AGACTGGGAT 
GCCAATCCAA AAATCCAGGA GTTCAAGAAA AAACATAATT TAAAAACCAA CCATGAACTG 
CAGACTTATT TTACTATGCA GTTAGCCCCA ATGCTTAAAA AACATGGAAA ACAATTAATG 
GGCTGGGAAG AAATTTTAAC CAAAGATCTT TCTAAAGAAG CAATTGTACA TTCGTGGAGA 
GGTCCAAATG AAGGAATGGT TGCAGGGCAG TCATTAGTTG ATGCAGTTAA AAAAGGATAT 
AAAACAGTAT TATCAAACGG ATTTTATATT GATTTAATGT ATCCAGTAGC AAGTCATTAT 
TTAAATGATC CTATGCCAAA AGGAGCCGAT TTATCTGCAG AAGAAAAAGC AAGAATTTTG 
GGTGGAGAAG CTACAATGTG GACAGAACTT GCCACGCCGG AAACATTTGA TTCAAGAGTT 
TGGCCAAGAA CAGCAGCAAT TGCAGAAAGA TTATGGTCTG CTGAGAATAT TACAGATGTT 
GCTAATATGC GTAAACGTCT TGAAAGCGTA TCATTTAGAT TAGAAGAATT AGGATTAACA 
CATATTAAAA ACAAAGCCGT AATTCTTAGA AATATTGCGA ATAACCAGAA TATTAAATCT 
GTTAATGAAT TTACAAATGT TTGTGAACCA TTAAAAGGAT ATACAAGAAA TAAAGGAGGA 
ACTGAATATC AAATGTATTC TCCGTTTACA CTTTTTGCAG ATGCCTGTAC TCCGGATGCA 
AAAGATTCTC TGGCTTTTGA TGAAGCCGTG AGCCAATATC TGGCAAATAA ATCAGCAGAT 
AACAAAGCAA AAGTGGCAGC ATTTTTCAAT AAATGGATTG CAGTTAATAA AGGATTAGTT 
GAATTAAGTG CCAATGCGCC TTTAGTACAG CCAATTCTGC CTTTATCTAA AAAATTAAGC 
GACGCATCGC AAGAATTGCT GCTTGTATTA GATAATAAAT CGACTTTAAA AACAGCCGAT 
TTAAAAACCT TAATAGAACA ATGTAATACA AAAGATCATG CTGACGTAGA GTTGTCAGTT 
TATGAAAGTT TAAAGAAACT AATTTAG 

 

Protein sequence

MKYLFVLLLA GVTANAQMQK EQLNLMPWPQ NVVVNDGNFT LTKNFKVNIS GNPDSRIFGG 
VTRFLRRLDG RTGIFFEQGF ITKLNEFPNA ELQINCTKNG KIGLYEDESY SLDVKANKIT 
INATSDLGAL HGLETLLQLL QNDSKKFYFP VSQISDFPRF TWRGLMLDAS RHFQPVDVVK 
RNLDALAAMK MNVFHWHLVD DQGWRIETKK HPKLIELASD GLYYTQEEIR NIVKYADERG 
ILIVPEIDVP GHGSAILTAY PEIGSKVITL TGGTSEKNIQ GTAISTYRIE RNAGIFSPTL 
DPSNPKTYKI LSELFDEVCP LFPGAYFHIG GDENEGKDWD ANPKIQEFKK KHNLKTNHEL 
QTYFTMQLAP MLKKHGKQLM GWEEILTKDL SKEAIVHSWR GPNEGMVAGQ SLVDAVKKGY 
KTVLSNGFYI DLMYPVASHY LNDPMPKGAD LSAEEKARIL GGEATMWTEL ATPETFDSRV 
WPRTAAIAER LWSAENITDV ANMRKRLESV SFRLEELGLT HIKNKAVILR NIANNQNIKS 
VNEFTNVCEP LKGYTRNKGG TEYQMYSPFT LFADACTPDA KDSLAFDEAV SQYLANKSAD 
NKAKVAAFFN KWIAVNKGLV ELSANAPLVQ PILPLSKKLS DASQELLLVL DNKSTLKTAD 
LKTLIEQCNT KDHADVELSV YESLKKLI