Gene Fjoh_4550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4550 
Symbol 
ID5092623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5494704 
End bp5496323 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content37% 
IMG OID644743967 
ProductABC transporter related 
Protein accessionYP_001196868 
Protein GI146302277 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.767236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACAG TCAATAATTT ATCAGTTCAG TTTGGTAAAA GAATTTTATT CGACGAAGTA 
AATACTACGT TTACTCACGG AAATATTTAC GGCGTTATTG GAGCAAATGG TGCAGGAAAA
TCTACTTTCT TAAAAGTGAT TTCGGGCGAT ATTGATCCAA CTTCTGGTCA CATTCATTTA
GAGCCGGGAA AACGTATGTC GGTTTTAAAC CAGAACCACA ACATGTTCGA CGAGCATACT
GTTTTGGAAA CCGTTTTAAT GGGAAATAAA GTTCTGTACG CTGTTAAAAA AGAAATGGAT
GAACTTTATT TAGATTATAA TGATGCCAAT GCAGACAGAA TAGGGGAGTT ACAAGTTCAG
TTTGAAGAAA TGAACGGATG GAATGCCGAT TCTGATGCTG CAGCGATGTT GTCTAACTTA
GGAATCACAG AAGCAGATCA TTATACTTTA ATGGCCGATA TGGAAGGAAA AATGAAAGTA
CGTGTGCTTT TGGCGCAGGC ACTTTTTGGA AATCCTGACT TGCTTATTAT GGATGAGCCT
ACCAACGATT TGGATTTCGA GACAATCGCT TGGTTAGAAA ACTTCTTAGC AAACTACGAA
AACACTGTAA TTGTGGTATC TCACGACCGT CACTTTTTAG ATGCGGTTTG TACACATATT
TCTGATATTG ATTTTGGGAA AATCAATCAC TATTCAGGAA ACTATACGTT CTGGTACGAG
TCCAGCCAAT TAGCGGCAAA ACAGCGTGCA CAGCAAAACA AAAAAGCTGA AGAGAAGAAA
CAAGAGCTGG AAGAATTTAT TCGTCGTTTT AGTGCAAACG TGGCGAAATC GAAACAAGCA
ACTTCTCGTA AAAAAATGAT TTCGAAATTA AATATTTCTG AAATTAAACC TTCAAGCCGT
CGTTATCCAG CAATTATCTT CGATCAGGAT CGTGAAGCAG GAGATCAGAT TTTAAATGTA
GAACATTTGT CTGCTTCTGT AGACGGAGAA GTTCTTTTTA AAGATGTGCA TTTGAATATG
GCAAAAGGCG ATAAAATCGT TCTTTTCTCT AAAGATTCAC GTGCAACAAC TGCTTTCTAC
GAAATCTTAA ACGGAGAACA AAAAGCAGAT TCTGGAACTT TCGATTGGGG AATTACAACC
AACCAAGCCT ATTTACCAGC TGAAAACCAT GATTTCTTCG AAAATGATTT AACTTTAGTA
GACTGGTTAC GTCAGTACGC TAAAACAGAA GAAGAGCGTG ATGAGGTATT TATTAGAGGT
TTCTTAGGAA AAATGATTTT CTCTGGAGAA GAAGCATTAA AAACGTCTAG GGTTTTATCT
GGGGGAGAAA AAGTACGTTG TATGCTTTCT AGAATGATGA TGGAGCGTGC AAACGTTTTA
ATGCTTGATG AGCCAACAAA CCACTTAGAT TTGGAATCTA TTACAGCTTT CAACAACTCA
TTGAAAAACT TTAAAGGTTC TGTAATCTTT ACAACACATG ACCACGAGTT CGCGCAGACT
GTTGGTAACA GAATCGTAGA ATTAACACCA AACGGAGTTA TCGATCGTTA CATGACATTT
GACGAATATC TTGATGATGA AAAAATTCAG GAACAAAGAA AAAAGATGTA CAATCTTTAA
 
Protein sequence
MLTVNNLSVQ FGKRILFDEV NTTFTHGNIY GVIGANGAGK STFLKVISGD IDPTSGHIHL 
EPGKRMSVLN QNHNMFDEHT VLETVLMGNK VLYAVKKEMD ELYLDYNDAN ADRIGELQVQ
FEEMNGWNAD SDAAAMLSNL GITEADHYTL MADMEGKMKV RVLLAQALFG NPDLLIMDEP
TNDLDFETIA WLENFLANYE NTVIVVSHDR HFLDAVCTHI SDIDFGKINH YSGNYTFWYE
SSQLAAKQRA QQNKKAEEKK QELEEFIRRF SANVAKSKQA TSRKKMISKL NISEIKPSSR
RYPAIIFDQD REAGDQILNV EHLSASVDGE VLFKDVHLNM AKGDKIVLFS KDSRATTAFY
EILNGEQKAD SGTFDWGITT NQAYLPAENH DFFENDLTLV DWLRQYAKTE EERDEVFIRG
FLGKMIFSGE EALKTSRVLS GGEKVRCMLS RMMMERANVL MLDEPTNHLD LESITAFNNS
LKNFKGSVIF TTHDHEFAQT VGNRIVELTP NGVIDRYMTF DEYLDDEKIQ EQRKKMYNL