| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4542 |
|---|
| Symbol | |
|---|
| ID | 5092615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 5488492 |
|---|
| End bp | 5489136 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644743959 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase |
|---|
| Protein accession | YP_001196860 |
|---|
| Protein GI | 146302269 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
|---|
| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT TAAGCAATTA TAGAAAGTCT TACGAGAAAA GCGAATTATT AGAAACTAAT
ATTCCGGAAG ATCCAATTAA TCTTTTTAAC CGCTGGTTTC ATGAAGTTGA AGATTTTGGC
GGAAGCGGAG AAGTAAATGC CATGACGGTT TCAACAATTG GACTGGATGG ATTTCCAAAA
TCGCGCGTTG TTTTACTTAA AAAATTCTCA GAAGAAGGAT TTATATTCTA CACCAATTAT
AATTCTGAAA AAGGAAAAGC AATTGAAGCA AATCCTAATG TTTGTTTGTC ATTTTTCTGG
CAGGAAGCAG AACGTCAGGT AATTATTAAG GGAATCGCTC AGAAAACTTC TGAAATTATA
TCTGATAACT ATTTTGATTC AAGACCTGAC GGAAGTAAAT TAGGCGCAAT TGTTTCACAT
CAAAGTGAAG TAATTCCGTC GAGAACTTTT TTAGAAGAAA ATTTAAAGAA ACTTGAAGCA
GAATTTGAAG GAAAACCTAT CCCAAGACCT GAAAACTGGG GAGGTTATTT AGTAACTCCA
TTACAAGTAG AATTCTGGCA GGGAAGACCT AACAGACTGC ACGATAGAAT TCGTTATACA
AGCCAATCTG ATTTTTCATG GACGATTGAG CGCCTTTCTT CTTAA
|
|---|
| Protein sequence | MNDLSNYRKS YEKSELLETN IPEDPINLFN RWFHEVEDFG GSGEVNAMTV STIGLDGFPK
SRVVLLKKFS EEGFIFYTNY NSEKGKAIEA NPNVCLSFFW QEAERQVIIK GIAQKTSEII
SDNYFDSRPD GSKLGAIVSH QSEVIPSRTF LEENLKKLEA EFEGKPIPRP ENWGGYLVTP
LQVEFWQGRP NRLHDRIRYT SQSDFSWTIE RLSS
|
|---|
| |