Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4515 |
Symbol | |
ID | 5092588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5456172 |
End bp | 5457581 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743931 |
Product | exonuclease V subunit alpha |
Protein accession | YP_001196833 |
Protein GI | 146302242 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTCAT CCGCATTTTA CGGCGTTTTG CAAAGAAGAT TTCCTTTTGC ACCAACTTAC AAACAGGATA TTTTTTTTCA AAAAATTGCT ATTTTTCTAA CAGAACCGGC TAACGACACA ATTTTTGTGC TGAAAGGATA TGCCGGAACA GGAAAAACAA CCGTGATTTC GACGATTGTA AATAATCTGG GTGATATTAA TAAAAAGTTT GTCCTATTGG CACCAACAGG ACGCGCGGCA AAAGTAATTG CCAATTATTC GAATACGGCT GCTTTTACAA TTCATAAAAA AATATATTTT CCCAAAAAAT CATCGGGTGG CGGCGTGGCT TTTACCAGAC AAGTCAACAA ACATAAAAAC ACCATTTTTA TAGTCGATGA GGCTTCGATG ATTTCAGATA GTACTTTAGA CAGCGGTTCA CTTCTGGATG ATTTGATCTC ATACGTGTAT TCTGGAAACA ACTGTAAAAT GATTCTTTTG GGAGATACGG CGCAGCTTCC GCCGGTAAAT TTAGATATCA GTCCGGCCTT AGATACACAT ACTTTGGGAG TTCATTATGA CAAAGAAATC GAACATATCG AACTTGATGA AGTTATGCGT CAGGAAGAAA GTTCCGGAAT TTTATTTAAC GCAACTGAAT TAAGGGAATT ATTAAAAGAA AGTTTTATTG CTGAATTCAG ATTCAATGTC AAAAAGTTCA AAGATATCGT TCGGTTAACG GATGGTTATG ATATTCAGGA TGCCATAAAT ACAGCCTATA GCAATTATAG TATTGAAGAT ACGGCTTTTA TTGTTCGTTC TAATAAAAGA GCAAACCAGT ACAATGAACA AATCAGAACC CGAATTTTGT TTAAAGAAAG CGAACTTTCT GTTGGTGATT TTTTGATGGT TGTAAAGAAC AATTATTTCT GGCTTAAAGA AACTGATGAA GCCGGATTTA TTGCAAATGG TGATATCATT GAAGTTTTAG AATTATTTGG AATCAAAGAA CTGTACGGAT TTACTTTTGC GAAAGTAAAA ATCAGAATGG TTGATTATCC TGATCAAAAA CCTTTTGAAA CGGTTTTAAT TTTAGATACG ATAAAAAGTG AATCTCCATC GTTGACATAC GAAGAATCAA ATCGCCTATA TGAAGAAGTG ATGAAAGATT ATGAAGATGA GTCAACAAAG TACAAAAGAT TTCAAAAGGT TAAGGAAAAT GAATATTTTA ATGGTTTACA GGTAAAGTTT TCATACGCGA TAACGTGTCA TAAATCGCAG GGAGGGCAGT GGAATACAGT TTTTATAGAA CAGCCGTATC TGCCAAACGG AATTGACCAC GATTATATTC GATGGCTCTA CACGGCCATG ACTCGTGCCA AAAACAAATT GTATTTGATT GGTTTTAAAG ACGAAAGTTT TGAAGAATAA
|
Protein sequence | MNSSAFYGVL QRRFPFAPTY KQDIFFQKIA IFLTEPANDT IFVLKGYAGT GKTTVISTIV NNLGDINKKF VLLAPTGRAA KVIANYSNTA AFTIHKKIYF PKKSSGGGVA FTRQVNKHKN TIFIVDEASM ISDSTLDSGS LLDDLISYVY SGNNCKMILL GDTAQLPPVN LDISPALDTH TLGVHYDKEI EHIELDEVMR QEESSGILFN ATELRELLKE SFIAEFRFNV KKFKDIVRLT DGYDIQDAIN TAYSNYSIED TAFIVRSNKR ANQYNEQIRT RILFKESELS VGDFLMVVKN NYFWLKETDE AGFIANGDII EVLELFGIKE LYGFTFAKVK IRMVDYPDQK PFETVLILDT IKSESPSLTY EESNRLYEEV MKDYEDESTK YKRFQKVKEN EYFNGLQVKF SYAITCHKSQ GGQWNTVFIE QPYLPNGIDH DYIRWLYTAM TRAKNKLYLI GFKDESFEE
|
| |