| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4495 |
|---|
| Symbol | |
|---|
| ID | 5091919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5424296 |
|---|
| End bp | 5424991 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644743911 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001196813 |
|---|
| Protein GI | 146302222 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC TAATTATTGA AGACGAAGCG AGAATTGCAA AACGAATCGA AAGAATGACC
AGAGGTTTTT TTAATAAAGA TGTCCAGATT TTTCTTTCTG ATTCGGTTGA AAACGGTTTA
AATACAATTA ATCAAAATGA AATTGATTTA TTGCTTCTGG ATTTAAACCT AAATGGTGAA
GATGGATTTG ATGTCCTGCA GACTGTTGTA TCAAAATCTT TTCAAACCAT TATTATTTCA
GCATATACAG ACAAAGCTAT TACTGCATTT AATTACGGCG TTTTAGATTT TGTACCCAAA
CCATTTGACG AAAACAGACT CGCACAAGCT TTTACCCGTT ATACAACACC AGAAAGAAAA
GCCAGCAGTG AAATTCAGTT TTTAGCTGTA AAAAAAGCAA AAACTATTAA ACTCATTACT
ATTACAGATA TTAAATACAT AAAAGGCGCA GGCATTTATA CAGAATTGCA TTTACATGAC
GGCCGTATAG AATTACATGA CAAATCGCTT GAATCACTGG AAAAACTGCT GCCAATAACT
TTTGAACGAA TACACAAATC ATACATTCTC TGCTGGAATG AAGCAGAAAA GCTCGTTGTA
GAAGCCGGAG GCCGATATCA GATGTTACTA AAAAATGGAG AAATACTACC TGTAGGCCGT
TCTAAATATA AAGAAATCAA ATATAAATTG ATATAG
|
|---|
| Protein sequence | MKILIIEDEA RIAKRIERMT RGFFNKDVQI FLSDSVENGL NTINQNEIDL LLLDLNLNGE
DGFDVLQTVV SKSFQTIIIS AYTDKAITAF NYGVLDFVPK PFDENRLAQA FTRYTTPERK
ASSEIQFLAV KKAKTIKLIT ITDIKYIKGA GIYTELHLHD GRIELHDKSL ESLEKLLPIT
FERIHKSYIL CWNEAEKLVV EAGGRYQMLL KNGEILPVGR SKYKEIKYKL I
|
|---|
| |