| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4441 |
|---|
| Symbol | |
|---|
| ID | 5093956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5362732 |
|---|
| End bp | 5363658 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644743862 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001196764 |
|---|
| Protein GI | 146302173 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA AAGACACCGC CACAAGGTCA TTATATGATT TGTACATCGA ATTAGGTGTA
TCAGTAGATA TGCTTGACCC AAAAGCCGGC TTCGCTGTAG TTAATTTAAA CGATGTCGGT
TTTGAGCTGC CTTATAAATC GCCTCCATTT AGGCCCAACT ATTTTTCGTT CCTATTTGTA
AAAAAAGGTT CCGGACAATA CACAATTGAC AACCAAACTT TCCTGACTGA ACCTGGATCT
ATTTATTTTA CAAATCCAAG TAATTACAGA ACCTTTGAAT GGAACACAAT TGATGAAATT
TATTTAATTT GTTTTGATGA AACTTTCCTG AAAGAAAATG TACATCAGGA TGTTTTTAAT
GAATTTTCGT TTTTATTGAC CGAAACGGTA CAGCCCAAAA TATTGAATGT TGCGTTTTAT
CAGCAAATTG AACAACTCTA TCTTCAAATT CACAAGGAAT ATTTAAACAA TTCCAGATAT
AAGTACAGAA TAATAGGCAG CTTGTTTGTT GTGTTATTAA TAAAGATAAA GGAATATTTT
TGGGAAGATT ATAATCCTAT ATATGAAGGT AATCGCTCCT CACAGATTGT AAAAGATTTT
AAGCGTACAT TAGAACAGCA TTATCGCGAT TTAAGCAGCG GTAAAACTCA GACTGTTTTT
AGAGTGCAGG ATTATGCCAA TACTCAAAAT TTGCATCCCA ATTATTTAAG CACGGTAATA
AAAAGCAAAA CAGGAAAACC TATCGCCACA TGGATTGCCG ATAAAACAAT ATCAGAAGCC
AAATCTTTAC TACAAAATTC AACAATCTCG ATCAAAGAAA TTGCTTTCCT GCTTGGTTTT
TCAGAAGCGG CTCATTTTAG CAATTACTTT AAAAAACATA CCAATACCTC TCCTGTCCTA
TACCGGAAGG AACACATCTC CAACTAA
|
|---|
| Protein sequence | MSEKDTATRS LYDLYIELGV SVDMLDPKAG FAVVNLNDVG FELPYKSPPF RPNYFSFLFV
KKGSGQYTID NQTFLTEPGS IYFTNPSNYR TFEWNTIDEI YLICFDETFL KENVHQDVFN
EFSFLLTETV QPKILNVAFY QQIEQLYLQI HKEYLNNSRY KYRIIGSLFV VLLIKIKEYF
WEDYNPIYEG NRSSQIVKDF KRTLEQHYRD LSSGKTQTVF RVQDYANTQN LHPNYLSTVI
KSKTGKPIAT WIADKTISEA KSLLQNSTIS IKEIAFLLGF SEAAHFSNYF KKHTNTSPVL
YRKEHISN
|
|---|
| |