Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4430 |
Symbol | |
ID | 5093945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5341530 |
End bp | 5344040 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644743851 |
Product | Alpha-glucosidase |
Protein accession | YP_001196753 |
Protein GI | 146302162 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.121046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CTATTTTTTA TTGCTGCGTA ATTTTCTGTA TTATGGTTTC TCAAGCATAC TCGCAAAAGA AAGAGCAGTA TTTGGGGAAT TGCACCGCTT ATTCAGTAAA AGGAAATAAA GTAGTTTTCA GCTGTGCTAA TAATTCAAAA ATCATGCTTC AGTTATGCAG CGGGGAAGTC GTTAAAATCT GGGCATCTGC TGATGGCAAT TTTGTCAGGA ATAATGAATC TTTTGCAGTT ATAGAAGAAG ATCTGGGCTG GAAAGGAAAT GTTACTGTAA AGGAGGAACC ATCAACCTAT GAAATTTTTA CAGAGCAACT AAGGATACGG GTAAATAAGG CTCCGTTTCA GTTGCAGATA TTTGACAAGT ATCAAAAACT TCTTTTCAGT GATTATGCTG AAAAAGGATT TGTTAATGAC AATGGCAAAA TAAGAACCAA TAAAGTCTTA CGAAATGACG AACAATTTTT TGGATTGGGT GAAAAATCAG GGAACCTGAA TCGTCGTGGA AGTGCTTATA AAATGTGGAA CAGCGATCAG CCATGTTATG GCGTTAATGA AGATCCGCTT TACAAAAGTA TTCCTTTTTT TATGAGTAGT TACCGTTACG GAATTTTCTT TGACAATACC TATAAGACAG AATTCAAGTT CGGAAGTGAG AGTAATGACT ATTATTCATT TGAAGCGCCG GCTGGGCAGA TGGTCTACTA CTTTATGTTT GGAAACGACT ACAAGGAGAT AATACAAAAC TATATTGCCT TAACAGGGAA ACCGATTATG CCGCCTAAAT GGGCATTGGG CTTTTCGCAA TGCAGAGGAG ATTATACACG TGAAGATCAG GCCAGGGAAA TTGCTGCAGA GTTCCGAAAA AGAAAAATCC CATGCGATAT TATCTATCAG GATATTGGCT GGACAGAAGG GCTGCAGGAT TTTGACTGGA GAAAAAACAA TTATAACAAT CCAAAAGGGA TGGTAAAAGA TTTAAGTGAT ATGGGCTTTA AAATGATTGT TTCTCAGGAT CCTGTTATTT CACAGGCAAA CCAGCAACAA TGGAAAGAGG CTGATGCACT TGGTCATCTG GTAAAAGATG TCCGTACAGG CAAATCTTAT GATATGCCAT GGCCTTGGGG AGGCAATTGC GGGGTTGTAG ATTTTACAAA ACCTGAGGTG GCAGATTGGT GGGGCAGCTA TCAGCAGAAA CCTTTAAACG ATGGAGTTCG CGGATTTTGG ACAGATATGG GAGAACCAGC ATGGAGCAAT GAAGATGCTG TTGACAGACT CAATATGAAA CATCATCTTG GAATGCATAA CGAGATTCAT AATGTTTATG GTTTTACTTG GGATAAGGTG GTTACAGAGC AGTTTTATAA GCATAATCCA AATAAAAGAA TATTTCAAAT GACCAGAGCG GCTTATGCGG GGTTGCAGCG TTATACTTTT GGATGGAGCG GTGATTCAGG AAATGGTAGC AATGTGCTGG ATGGATGGAA ACAAATGGCC AATCAGATTC CTGTAGGTCT TTCTGCAGGG ATGGGGCTAA TTCCGTTTTG GACCTGCGAT ATTTCAGGGT ACTGCGGGGA TATAAAGGAT TATGATGCTA TGGCAGAATT ATATGTAAGA TGGCTGCAGT TTGGTGTTTT TACCCCATTG AGCCGCGCCC ATCATGAAGG TGGAAACGCA GTTGAACCAT GGAAATTCGG AACGGAGGCA GAAAATATAA GCCGAAAAAG TATAGAATTA AAATACAAGC TTTTCCCATA TCTATATACA TATGCCCGCG AAGCTCACGA TACGGGACTG CCGATCATGA GAGCCTTGCT GTTGGAATAT CCGAATGATA AAGAAACATT TAAATTAAAT GGGCAGTTTC TTGTTGGAAA AGAACTCTTG GTAGCACCGG TCGTAGAACA AGGTGCTGTT ACTAAAGATG TATACCTTCC TGAAGGAGAG TGGATTGATT TTAATAATTG CAAAACTAAG TATAAAGGAG AGCAATGGAT TACTGTTGAT GCCCCCTTGA ATACAATTCC TGTCTTTGTG AAGAAAGGGA GCATAATTCC ACAGATGCCT GTAATGCAGT ATATTGATGA AAAGAAAGTA TATCCGGTTA CATTTGACAT TTTTCCAGGT AATCTAAATA AAGAAACCTC TTTTACATTC TATGAAGACG ACGGAGAAAG CCGTGATTAC GAAAGAGATG TCTTCTGTAA AACCAAGATA ACTTCAAAGG CTTCAAATGA AGAAATCAAG ATTACTGTCG GTGAGCGTGA ATATAAAGGA TATAGTCCTG CCGGCCCAAG AAATTTCATT CTAAAAATTC ATGCATCGAA CAAACCTAAG GATGTTTTTG CAGGTGGAGA AAAACTTAAA AATGTTAAAC CGCATGTTTT GGAGAAAAAT ATTGAAGCCG ATTTTACAAA AATAAACTGG AGCTGGAATG AAGCTGAAAA TGTTATCTCA GTAAGAATTC CTGATTCAGG AAAAAATGCA GTAATCACAA TTAAAAATTA A
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Protein sequence | MKKSIFYCCV IFCIMVSQAY SQKKEQYLGN CTAYSVKGNK VVFSCANNSK IMLQLCSGEV VKIWASADGN FVRNNESFAV IEEDLGWKGN VTVKEEPSTY EIFTEQLRIR VNKAPFQLQI FDKYQKLLFS DYAEKGFVND NGKIRTNKVL RNDEQFFGLG EKSGNLNRRG SAYKMWNSDQ PCYGVNEDPL YKSIPFFMSS YRYGIFFDNT YKTEFKFGSE SNDYYSFEAP AGQMVYYFMF GNDYKEIIQN YIALTGKPIM PPKWALGFSQ CRGDYTREDQ AREIAAEFRK RKIPCDIIYQ DIGWTEGLQD FDWRKNNYNN PKGMVKDLSD MGFKMIVSQD PVISQANQQQ WKEADALGHL VKDVRTGKSY DMPWPWGGNC GVVDFTKPEV ADWWGSYQQK PLNDGVRGFW TDMGEPAWSN EDAVDRLNMK HHLGMHNEIH NVYGFTWDKV VTEQFYKHNP NKRIFQMTRA AYAGLQRYTF GWSGDSGNGS NVLDGWKQMA NQIPVGLSAG MGLIPFWTCD ISGYCGDIKD YDAMAELYVR WLQFGVFTPL SRAHHEGGNA VEPWKFGTEA ENISRKSIEL KYKLFPYLYT YAREAHDTGL PIMRALLLEY PNDKETFKLN GQFLVGKELL VAPVVEQGAV TKDVYLPEGE WIDFNNCKTK YKGEQWITVD APLNTIPVFV KKGSIIPQMP VMQYIDEKKV YPVTFDIFPG NLNKETSFTF YEDDGESRDY ERDVFCKTKI TSKASNEEIK ITVGEREYKG YSPAGPRNFI LKIHASNKPK DVFAGGEKLK NVKPHVLEKN IEADFTKINW SWNEAENVIS VRIPDSGKNA VITIKN
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