| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4409 |
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| Symbol | |
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| ID | 5093926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5319875 |
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| End bp | 5321311 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644743832 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001196734 |
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| Protein GI | 146302143 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.357765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATA ACAGAAATAT AAAATACGCA GGCCTAGCCT GCTTATTGCT CTCTATAGCG
GGCTGTAAAA CGACGACTAT TGCAGAAAAA ACAGAAAACA AAACAGTGCC AGAAAACTAT
GCCGATAATG GCTTGGACAC TCTTAATACT GGAAAAGTAA AATGGAGAAG CTATTTTACT
GATGAAAATT TAGAAAACCT GATTGATATT GCGCTCAAGA ACAATCAGGA ATTAAATAGT
ACGCTTCAGG AAATCGAAAT TGCAAGAAGC GAAGTAAAAG CCCGAAAAGG AGAATATCTG
CCTTTTGTTG GCTTTAGCGC TGGTGCAGAT GTAACCAAAT CCGGAAGATA CACAAGCACA
GGTTCAGGCG AGGCAACAAC AGAGATTATG CCGGGCAGAG AAACGCCTGA TCCGCTTCCC
AATTACCGTT TTGCACTGAC TTCAAGCTGG GAAATCGATA TTTGGAACAA GCTGCATACT
GCCAAAAAAG CCGCTTTAAA CCGTTATTTG GGCTCTATTG AAGGAAAGAA TTTCGTAGTC
ACCAATCTGA TTGCAGAAAT AGCCGATTCG TATTACGAAC TTTTAGCGTT GGATAATCAA
TTGGAAATCA TCAGACAAAA TATTGATATT CAAACGAATG CCTTAAAAGT CGTAAAAATA
CAAAAAGAGG CGGCAAGGGT AAACGAACTG GCTGTGCGCC GGTTTGAGGC TCAGATTTTA
AGCACGCAAA GCCTTCAGTT TGGCATACAG CAGCAGATAA CCGAAACAGA AAATAAAATC
AATTTCCTCT TGGGGCGTTT TCCTCAAAAA ATTGCCAGAA ACAGCAATAC ATTCAGTTCT
ATAACTCCTG CAGATATTCA TGCCGGAGTG CCTTCTCAGC TTCTGGAAAA TCGTCCCGAC
ATTAAAAAAG CAGAAATGGA ACTAATCGCT GCAAAACTCG ACATTAAGGC CGCTAAAGCT
AAATTTTATC CATCGCTGGG CATTTCAGCA GGAATTGGTT ATGAAGCTTT CAATGCCAAG
TATCTGCTGA CTTCTCCAGA ATCTCTATTG TATTCCATAG CCGGAGATTT GGTTGCTCCT
TTGATTAACA GAAATGCCAT TAAAGCAGAA TATCTTACCG CTGGCGCCAA ACAGATCCAG
GCAGTCTACA ATTATGAAAG GACCCTGGTA AATGCTTACG TTGAAGTGGC AAACCAACTG
TCTAAAATTC AAAATACGGC AAAAAGCTAT GATTTGAAGT CAAAACAGGT TGAGGCTTTA
AACGAATCTG TTCAGATATC CACTAACTTG TTTAGTTCTG CCAGGGCAGA TTATATGGAA
GTTTTACTGA CCCAGAAAGA TGCTTTAGAA TCTAAGTTTG AACTTATCGA AACCAAAAAA
CAGCAGATGA ATGCTTTTGT AAATATTTAC AAAGCATTAG GCGGCGGGTG GAATTAG
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| Protein sequence | MKNNRNIKYA GLACLLLSIA GCKTTTIAEK TENKTVPENY ADNGLDTLNT GKVKWRSYFT
DENLENLIDI ALKNNQELNS TLQEIEIARS EVKARKGEYL PFVGFSAGAD VTKSGRYTST
GSGEATTEIM PGRETPDPLP NYRFALTSSW EIDIWNKLHT AKKAALNRYL GSIEGKNFVV
TNLIAEIADS YYELLALDNQ LEIIRQNIDI QTNALKVVKI QKEAARVNEL AVRRFEAQIL
STQSLQFGIQ QQITETENKI NFLLGRFPQK IARNSNTFSS ITPADIHAGV PSQLLENRPD
IKKAEMELIA AKLDIKAAKA KFYPSLGISA GIGYEAFNAK YLLTSPESLL YSIAGDLVAP
LINRNAIKAE YLTAGAKQIQ AVYNYERTLV NAYVEVANQL SKIQNTAKSY DLKSKQVEAL
NESVQISTNL FSSARADYME VLLTQKDALE SKFELIETKK QQMNAFVNIY KALGGGWN
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