Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4404 |
Symbol | |
ID | 5093921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5312000 |
End bp | 5313310 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644743827 |
Product | hypothetical protein |
Protein accession | YP_001196729 |
Protein GI | 146302138 |
COG category | [S] Function unknown |
COG ID | [COG1808] Predicted membrane protein |
TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.938906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA TTACTGACAT TCTGAATCTT AGAGAAGGAG AAGACGACAG AGAAAAAACA CTGGAGACCG TTAAAAAAAA CATTTCCTTT AAAGGAGCTA ATCTTTGGAT ACTGGCCTGC GCCATAATTG TGGCCTCGGT GGGGCTTAAT GTAAACTCAA CAGCGGTAAT CATTGGTGCG ATGCTGATAT CCCCTCTGAT GGGGCCTATT GTAGGGGCCG GTTTTGCCCT TGGCATTTAT GACTTTTCAC TGCTTAAAAA ATCACTCAAA AACCTGCTCA ATGCAACGGT TGTGAGTCTG GTGGTCTCCA CGCTTTATTT TTACCTGAGT CCTTTCAAGG ACGTTCAGTC GGAGCTTCTG GCGAGAACCT CCCCGAACAT TTACGATATT CTTATCGCTT TTTTTGGCGG TGTTGTCGGT GTCATTGCCG TTACGCGTTC AGAGAAAGGA AATCCTATTC CCGGAGTAGC TATTGCAACG GCTTTAATGC CGCCTTTATG CACGGCAGGT TACGGGATTG CAACTGCCCA GTGGACCTTT TTTCTAGGAG CTTTCTACCT TTATTGCATC AACTGCGTTT TTATAGGTAT CGCCACTTTT CTAATCATAA AATACCTGAA TTATCCTGCT GTTAAACAGG TGGATGAAAA ACAGCAGCAA AGGGTTAAGT ATATTATTGC TTTTCTCATT ACTGCCATGC TGGTTCCCAG CAGTTATCTT GCTTATTCTC TATACAGGGA ACAGCAGTTT AAAAAAAATG TAGAGCTTTT TGTTGACAGT GAGTTCAGCA GCAAGGGTTA TACAGTGGTT TATAAAAAGA CTGATTTTAA CGCGAAGCAG AAAAAACTCG AACTTGCTTT CCTGTCCAAA CGATTTTCCG ATAAGGAGAT TCAAAGCCTT AAAAACAGGC TCAACAGCAA TAAATACCTT GCCGGCACCA GCCTTCGCAT TAGACAGGAC AGCACCGACC GCTTTAACGA CATAAAAGGC GATATATTAA ATCAGATCAA GAGCAGTGAA AACGAAATGA ATGTAAAAGA TGTTAAAATA ATCCAGCTGG AAAAAGAGCT GAAAAAAAAC AAATTTGACA ACAAACAGCT TTTAAATGAA ATAAGAACCT TATTTCCTGA TGTCCATTCG CTTTCCATTG CCAAAAATAC TTTAGTGAAT TATAAAGACA GCACCTCAAC GATCACCGCT GTAATTTACG ATGCCTCAAA AAACCTAACG GCAGAGGATA GTGAAAAACT GACCAAATGG CTCAATGAAC GTCTTTTAGT GAAAGATGCC GCATTGTTTA AAAGACAGTA A
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Protein sequence | MRKITDILNL REGEDDREKT LETVKKNISF KGANLWILAC AIIVASVGLN VNSTAVIIGA MLISPLMGPI VGAGFALGIY DFSLLKKSLK NLLNATVVSL VVSTLYFYLS PFKDVQSELL ARTSPNIYDI LIAFFGGVVG VIAVTRSEKG NPIPGVAIAT ALMPPLCTAG YGIATAQWTF FLGAFYLYCI NCVFIGIATF LIIKYLNYPA VKQVDEKQQQ RVKYIIAFLI TAMLVPSSYL AYSLYREQQF KKNVELFVDS EFSSKGYTVV YKKTDFNAKQ KKLELAFLSK RFSDKEIQSL KNRLNSNKYL AGTSLRIRQD STDRFNDIKG DILNQIKSSE NEMNVKDVKI IQLEKELKKN KFDNKQLLNE IRTLFPDVHS LSIAKNTLVN YKDSTSTITA VIYDASKNLT AEDSEKLTKW LNERLLVKDA ALFKRQ
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