Gene Fjoh_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4404 
Symbol 
ID5093921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5312000 
End bp5313310 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content41% 
IMG OID644743827 
Producthypothetical protein 
Protein accessionYP_001196729 
Protein GI146302138 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.938906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TTACTGACAT TCTGAATCTT AGAGAAGGAG AAGACGACAG AGAAAAAACA 
CTGGAGACCG TTAAAAAAAA CATTTCCTTT AAAGGAGCTA ATCTTTGGAT ACTGGCCTGC
GCCATAATTG TGGCCTCGGT GGGGCTTAAT GTAAACTCAA CAGCGGTAAT CATTGGTGCG
ATGCTGATAT CCCCTCTGAT GGGGCCTATT GTAGGGGCCG GTTTTGCCCT TGGCATTTAT
GACTTTTCAC TGCTTAAAAA ATCACTCAAA AACCTGCTCA ATGCAACGGT TGTGAGTCTG
GTGGTCTCCA CGCTTTATTT TTACCTGAGT CCTTTCAAGG ACGTTCAGTC GGAGCTTCTG
GCGAGAACCT CCCCGAACAT TTACGATATT CTTATCGCTT TTTTTGGCGG TGTTGTCGGT
GTCATTGCCG TTACGCGTTC AGAGAAAGGA AATCCTATTC CCGGAGTAGC TATTGCAACG
GCTTTAATGC CGCCTTTATG CACGGCAGGT TACGGGATTG CAACTGCCCA GTGGACCTTT
TTTCTAGGAG CTTTCTACCT TTATTGCATC AACTGCGTTT TTATAGGTAT CGCCACTTTT
CTAATCATAA AATACCTGAA TTATCCTGCT GTTAAACAGG TGGATGAAAA ACAGCAGCAA
AGGGTTAAGT ATATTATTGC TTTTCTCATT ACTGCCATGC TGGTTCCCAG CAGTTATCTT
GCTTATTCTC TATACAGGGA ACAGCAGTTT AAAAAAAATG TAGAGCTTTT TGTTGACAGT
GAGTTCAGCA GCAAGGGTTA TACAGTGGTT TATAAAAAGA CTGATTTTAA CGCGAAGCAG
AAAAAACTCG AACTTGCTTT CCTGTCCAAA CGATTTTCCG ATAAGGAGAT TCAAAGCCTT
AAAAACAGGC TCAACAGCAA TAAATACCTT GCCGGCACCA GCCTTCGCAT TAGACAGGAC
AGCACCGACC GCTTTAACGA CATAAAAGGC GATATATTAA ATCAGATCAA GAGCAGTGAA
AACGAAATGA ATGTAAAAGA TGTTAAAATA ATCCAGCTGG AAAAAGAGCT GAAAAAAAAC
AAATTTGACA ACAAACAGCT TTTAAATGAA ATAAGAACCT TATTTCCTGA TGTCCATTCG
CTTTCCATTG CCAAAAATAC TTTAGTGAAT TATAAAGACA GCACCTCAAC GATCACCGCT
GTAATTTACG ATGCCTCAAA AAACCTAACG GCAGAGGATA GTGAAAAACT GACCAAATGG
CTCAATGAAC GTCTTTTAGT GAAAGATGCC GCATTGTTTA AAAGACAGTA A
 
Protein sequence
MRKITDILNL REGEDDREKT LETVKKNISF KGANLWILAC AIIVASVGLN VNSTAVIIGA 
MLISPLMGPI VGAGFALGIY DFSLLKKSLK NLLNATVVSL VVSTLYFYLS PFKDVQSELL
ARTSPNIYDI LIAFFGGVVG VIAVTRSEKG NPIPGVAIAT ALMPPLCTAG YGIATAQWTF
FLGAFYLYCI NCVFIGIATF LIIKYLNYPA VKQVDEKQQQ RVKYIIAFLI TAMLVPSSYL
AYSLYREQQF KKNVELFVDS EFSSKGYTVV YKKTDFNAKQ KKLELAFLSK RFSDKEIQSL
KNRLNSNKYL AGTSLRIRQD STDRFNDIKG DILNQIKSSE NEMNVKDVKI IQLEKELKKN
KFDNKQLLNE IRTLFPDVHS LSIAKNTLVN YKDSTSTITA VIYDASKNLT AEDSEKLTKW
LNERLLVKDA ALFKRQ