Gene Fjoh_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4402 
Symbol 
ID5093919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5308463 
End bp5310259 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content41% 
IMG OID644743825 
ProductCl- channel, voltage-gated family protein 
Protein accessionYP_001196727 
Protein GI146302136 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0824696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TAGTCCTAAA ACACCTTTTA AAAGTTAAAC ATATCCTTAT TGAAGGACAG 
AGAAAATTAA CCCGTAAACA GTTCATTTTT CTCTCCAGCG TACTGATTGG AATTATTGCT
GCCTTCGCGG TAATATTTTT AAAGGCTTTT GCTCATTGGG TCTTTTCCTT TGCAGCTTAT
ATCAACGCAA TAGTAAAATT AAGTTTTATA AACAGCATAC TTCCTTTGAT CGGGATACTG
CTGACTGTAC TTGTGGTGAA CAGGATCTTA GGAGGCAGCC TAGAAAAAGG GACTTCTCAG
ATCTTATACA TCGTCGCGCG AAAAGCCAGC ATCATCCCTA AAAAACAAAT GTACGCCCAG
ATCATGACCA GTTCCCTTAC TGTGGGGCTT GGGGGTTCGG CCGGGCTGGA GAGTCCAATT
GTAATTACCG GTGCCGCCTT TGGTTCCAAT TTTGCCCAGC AGTTCAAATT AAGCTACCAG
GAACGGACGC TGCTCATTGG ATGCGGGGTT GCAGCCGGTA TTGCCGCTGC TTTTAACGCT
CCTATAGCCG GTGTGCTTTT TGCTGTCGAG GTGCTGCTGG TAGATGTTAC AATCGCGGCT
TTTACCCCTA TTATGATTGC CGCTGCAACA GGCGCGCTTG TTTCAGCGGT GGTCTTAAAT
GAAAATATAC TGCTGGTTTT TAGAGAAAAG CAGACATTTG ACTATCATAA TATTCCATTT
TACGTGCTGC TGGGACTTTT TACTGGTCTT ACAGCGGTTT TCTACGCCAG GAAATTTTTA
AAAACAGAAC ATTTTTTTGC GCACTTAAAA TTTGGCCCCT ATAAAAAAGC TTTAATTGGA
GGAGCGGTAT TGGGAATTCT GATTTTTGTT TTCCCCACCC TGTTTGGTGA AGGTTATGAA
AGCATCAAAA TCCTAGCCGA TAAGAACCCG GGAGCACTTT TAAAAAACAC ACTCTTTGAG
CAATACAGCG ACAGCAGCTG GATACTGCTG GCTTTCGTTG GATTTTCAAT GTTCCTAAAA
GCTTTTGCTT CCGGGATAAC CCTTGGAAGC GGCGGGAACG GCGGGAACTT TGCTCCTTCT
TTATTTCTGG GTTCCTATGC TGGATACTTC TTTTCAAAGC TGTTAAATCT GGCCGGTTTA
ACCGATCTTC CGATAAGCAA CTTTACCCTT GTAGGGATGG CAGGAATTCT CAGCGGGCTG
TTTCATGCCC CGCTGACAGC GATTTTTCTT ATTGCCGAAA TAACGGGAGG CTACGATCTG
ATGATACCCC TTATGATTGT GGCTTCGGTG AGCTTTGCTG TTTCAAAAGG TTTTGAAAAA
CATTCTCTCG ATGTAAAAAA CCTTGCCAGA AAAGGAAATG CCTTCACCAG CAATAAAGAC
AGCAATATTT TATGCACGCT CAATATTGAG GATCTTGTAA AAAAAGATTA TTTAACCCTT
ACAGCAGATC AGGATATGGA AAAGATTTCC GATCTGCTGG CACACTGCGA TCAGGTGGTT
TTTGGAGTAG TGAGCCAGGA GAATGAGCTC GAGGGACTGG TTTATTTTGA TGACATCAGA
GAAATCATTT TTGATACTTC TCAAATTAAA AATACAATGG TAAAAGATAT AATGTTAAAG
CCGGTTCAAA CTATCTATCT TTTTGACAGC ATGGAAACCG TCATGAATAA ATTTGAGAAA
AGCAGTAAAA TATTTCTCCC TGTGGAAAAA AACGGCAGGT ATTATGGTTT TATGACTAAA
TCAGATATTT TGGAATCCTA CCGAAACAGG CTTAAATCCA TGACATTTGA ATACTAA
 
Protein sequence
MIKIVLKHLL KVKHILIEGQ RKLTRKQFIF LSSVLIGIIA AFAVIFLKAF AHWVFSFAAY 
INAIVKLSFI NSILPLIGIL LTVLVVNRIL GGSLEKGTSQ ILYIVARKAS IIPKKQMYAQ
IMTSSLTVGL GGSAGLESPI VITGAAFGSN FAQQFKLSYQ ERTLLIGCGV AAGIAAAFNA
PIAGVLFAVE VLLVDVTIAA FTPIMIAAAT GALVSAVVLN ENILLVFREK QTFDYHNIPF
YVLLGLFTGL TAVFYARKFL KTEHFFAHLK FGPYKKALIG GAVLGILIFV FPTLFGEGYE
SIKILADKNP GALLKNTLFE QYSDSSWILL AFVGFSMFLK AFASGITLGS GGNGGNFAPS
LFLGSYAGYF FSKLLNLAGL TDLPISNFTL VGMAGILSGL FHAPLTAIFL IAEITGGYDL
MIPLMIVASV SFAVSKGFEK HSLDVKNLAR KGNAFTSNKD SNILCTLNIE DLVKKDYLTL
TADQDMEKIS DLLAHCDQVV FGVVSQENEL EGLVYFDDIR EIIFDTSQIK NTMVKDIMLK
PVQTIYLFDS METVMNKFEK SSKIFLPVEK NGRYYGFMTK SDILESYRNR LKSMTFEY