Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4402 |
Symbol | |
ID | 5093919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5308463 |
End bp | 5310259 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644743825 |
Product | Cl- channel, voltage-gated family protein |
Protein accession | YP_001196727 |
Protein GI | 146302136 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0824696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA TAGTCCTAAA ACACCTTTTA AAAGTTAAAC ATATCCTTAT TGAAGGACAG AGAAAATTAA CCCGTAAACA GTTCATTTTT CTCTCCAGCG TACTGATTGG AATTATTGCT GCCTTCGCGG TAATATTTTT AAAGGCTTTT GCTCATTGGG TCTTTTCCTT TGCAGCTTAT ATCAACGCAA TAGTAAAATT AAGTTTTATA AACAGCATAC TTCCTTTGAT CGGGATACTG CTGACTGTAC TTGTGGTGAA CAGGATCTTA GGAGGCAGCC TAGAAAAAGG GACTTCTCAG ATCTTATACA TCGTCGCGCG AAAAGCCAGC ATCATCCCTA AAAAACAAAT GTACGCCCAG ATCATGACCA GTTCCCTTAC TGTGGGGCTT GGGGGTTCGG CCGGGCTGGA GAGTCCAATT GTAATTACCG GTGCCGCCTT TGGTTCCAAT TTTGCCCAGC AGTTCAAATT AAGCTACCAG GAACGGACGC TGCTCATTGG ATGCGGGGTT GCAGCCGGTA TTGCCGCTGC TTTTAACGCT CCTATAGCCG GTGTGCTTTT TGCTGTCGAG GTGCTGCTGG TAGATGTTAC AATCGCGGCT TTTACCCCTA TTATGATTGC CGCTGCAACA GGCGCGCTTG TTTCAGCGGT GGTCTTAAAT GAAAATATAC TGCTGGTTTT TAGAGAAAAG CAGACATTTG ACTATCATAA TATTCCATTT TACGTGCTGC TGGGACTTTT TACTGGTCTT ACAGCGGTTT TCTACGCCAG GAAATTTTTA AAAACAGAAC ATTTTTTTGC GCACTTAAAA TTTGGCCCCT ATAAAAAAGC TTTAATTGGA GGAGCGGTAT TGGGAATTCT GATTTTTGTT TTCCCCACCC TGTTTGGTGA AGGTTATGAA AGCATCAAAA TCCTAGCCGA TAAGAACCCG GGAGCACTTT TAAAAAACAC ACTCTTTGAG CAATACAGCG ACAGCAGCTG GATACTGCTG GCTTTCGTTG GATTTTCAAT GTTCCTAAAA GCTTTTGCTT CCGGGATAAC CCTTGGAAGC GGCGGGAACG GCGGGAACTT TGCTCCTTCT TTATTTCTGG GTTCCTATGC TGGATACTTC TTTTCAAAGC TGTTAAATCT GGCCGGTTTA ACCGATCTTC CGATAAGCAA CTTTACCCTT GTAGGGATGG CAGGAATTCT CAGCGGGCTG TTTCATGCCC CGCTGACAGC GATTTTTCTT ATTGCCGAAA TAACGGGAGG CTACGATCTG ATGATACCCC TTATGATTGT GGCTTCGGTG AGCTTTGCTG TTTCAAAAGG TTTTGAAAAA CATTCTCTCG ATGTAAAAAA CCTTGCCAGA AAAGGAAATG CCTTCACCAG CAATAAAGAC AGCAATATTT TATGCACGCT CAATATTGAG GATCTTGTAA AAAAAGATTA TTTAACCCTT ACAGCAGATC AGGATATGGA AAAGATTTCC GATCTGCTGG CACACTGCGA TCAGGTGGTT TTTGGAGTAG TGAGCCAGGA GAATGAGCTC GAGGGACTGG TTTATTTTGA TGACATCAGA GAAATCATTT TTGATACTTC TCAAATTAAA AATACAATGG TAAAAGATAT AATGTTAAAG CCGGTTCAAA CTATCTATCT TTTTGACAGC ATGGAAACCG TCATGAATAA ATTTGAGAAA AGCAGTAAAA TATTTCTCCC TGTGGAAAAA AACGGCAGGT ATTATGGTTT TATGACTAAA TCAGATATTT TGGAATCCTA CCGAAACAGG CTTAAATCCA TGACATTTGA ATACTAA
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Protein sequence | MIKIVLKHLL KVKHILIEGQ RKLTRKQFIF LSSVLIGIIA AFAVIFLKAF AHWVFSFAAY INAIVKLSFI NSILPLIGIL LTVLVVNRIL GGSLEKGTSQ ILYIVARKAS IIPKKQMYAQ IMTSSLTVGL GGSAGLESPI VITGAAFGSN FAQQFKLSYQ ERTLLIGCGV AAGIAAAFNA PIAGVLFAVE VLLVDVTIAA FTPIMIAAAT GALVSAVVLN ENILLVFREK QTFDYHNIPF YVLLGLFTGL TAVFYARKFL KTEHFFAHLK FGPYKKALIG GAVLGILIFV FPTLFGEGYE SIKILADKNP GALLKNTLFE QYSDSSWILL AFVGFSMFLK AFASGITLGS GGNGGNFAPS LFLGSYAGYF FSKLLNLAGL TDLPISNFTL VGMAGILSGL FHAPLTAIFL IAEITGGYDL MIPLMIVASV SFAVSKGFEK HSLDVKNLAR KGNAFTSNKD SNILCTLNIE DLVKKDYLTL TADQDMEKIS DLLAHCDQVV FGVVSQENEL EGLVYFDDIR EIIFDTSQIK NTMVKDIMLK PVQTIYLFDS METVMNKFEK SSKIFLPVEK NGRYYGFMTK SDILESYRNR LKSMTFEY
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