Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4394 |
Symbol | |
ID | 5093912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5298563 |
End bp | 5299807 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644743818 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_001196720 |
Protein GI | 146302129 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.536192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTATT TAGAAAAATT ATTAAACGGT GTGGAAGTTG AATGGAAAAC TGTAGATGAT ATTTTTTATA TTAAAAATGG TTATACGCCT TCTAAATCAA GTCAAGAATA TTGGACTAAC GGAACAAATC CTTGGTTTCG TATGGAAGAT ATTCGTAAAA ATGGTAGAGT ACTTTCGGAT TCTATACAGC ATGTTTCAGA TTCAGCAGTT AAAGGACAAC TCATTCCTGA AAACTCTTTA TTAATGTCTA CAACCGCAAC AATAGGTGAA CATGCATTAG TCTTGGTGCC TTACTTAACA AATCAACAAA TAACAAACTT TTCATTAAAA ACATCATTCA TAGATAAGGT CAGCATCAAG TATCTTTTTT ATTGTTTTTT TGATTTTGGA AAATGGTGTA TTGAGAATGC CAATAAAAAT GGAGGCTTAA GTATTATTGG AACAAATAAG TTAAAAGAAT ATACTATCGC TATTCCATCT TTAGAAATAC AACAAAAAAT AGTTGCAATT CTTGATTCAT TTACGGAGCT TACAGCGGAG CTTACAGCGG AGCTTACAGC GGAGCTTACA GCTCGTAAAA TGCAATATAG TTATTATAGA GAGAAATTGT ACACCTTTGA TAAAAACAAA GTACAACATT TACCAATGGA TGATGAAAGT ATTGGAGTGT TTCAAAGGGG TAAACGCTTT GTAAAAACTG ATTTGATTTC TGAAGGAGTT CCTGTTATTC ATTATGGCGA AATGTATACA CATTACGGAA CTTGGGCAGA TAAAACAAAA TCCTTTTTGA GTGAAGAACT AGTTAAAAAT AAAAATCTAC GGGTTGCCAA TAAAGGTGAT GTTGTCATAG TAGCAGCAGG TGAAACTATC GAAGATATCG GAATGGGAAC GGCTTGGTTA GGTGACGAAG GTGTAGTTGT TCATGATGCA TGTTTTTCAT ATAAAACAAC ATTAAACCCA AAGTTTGTGG CTTATTTTAC ACGCACAAAA CAATTCCATG ATCAAATTAA AAAACACATT TCTTCCGGTA AAATTTCTGC TATCAATGCA AATGGTTTAG GTAAAGCAAT AATTCCAGTT CCTTCAAAAG AAGAACAAGA ACGTGTAGTT TCTATTCTAG ACAAATTTGA TGTTTTAACT AATTCTATAA GTGAAGGTCT GCCAAAAGAA ATAGAATTAA GAAAAAAACA ATACGAGTAT TATAGAGACT TGTTACTAAC ATTTCCTAAG AACAATCTAG AATAA
|
Protein sequence | MSYLEKLLNG VEVEWKTVDD IFYIKNGYTP SKSSQEYWTN GTNPWFRMED IRKNGRVLSD SIQHVSDSAV KGQLIPENSL LMSTTATIGE HALVLVPYLT NQQITNFSLK TSFIDKVSIK YLFYCFFDFG KWCIENANKN GGLSIIGTNK LKEYTIAIPS LEIQQKIVAI LDSFTELTAE LTAELTAELT ARKMQYSYYR EKLYTFDKNK VQHLPMDDES IGVFQRGKRF VKTDLISEGV PVIHYGEMYT HYGTWADKTK SFLSEELVKN KNLRVANKGD VVIVAAGETI EDIGMGTAWL GDEGVVVHDA CFSYKTTLNP KFVAYFTRTK QFHDQIKKHI SSGKISAINA NGLGKAIIPV PSKEEQERVV SILDKFDVLT NSISEGLPKE IELRKKQYEY YRDLLLTFPK NNLE
|
| |