Gene Fjoh_4394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4394 
Symbol 
ID5093912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5298563 
End bp5299807 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content32% 
IMG OID644743818 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001196720 
Protein GI146302129 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.536192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATT TAGAAAAATT ATTAAACGGT GTGGAAGTTG AATGGAAAAC TGTAGATGAT 
ATTTTTTATA TTAAAAATGG TTATACGCCT TCTAAATCAA GTCAAGAATA TTGGACTAAC
GGAACAAATC CTTGGTTTCG TATGGAAGAT ATTCGTAAAA ATGGTAGAGT ACTTTCGGAT
TCTATACAGC ATGTTTCAGA TTCAGCAGTT AAAGGACAAC TCATTCCTGA AAACTCTTTA
TTAATGTCTA CAACCGCAAC AATAGGTGAA CATGCATTAG TCTTGGTGCC TTACTTAACA
AATCAACAAA TAACAAACTT TTCATTAAAA ACATCATTCA TAGATAAGGT CAGCATCAAG
TATCTTTTTT ATTGTTTTTT TGATTTTGGA AAATGGTGTA TTGAGAATGC CAATAAAAAT
GGAGGCTTAA GTATTATTGG AACAAATAAG TTAAAAGAAT ATACTATCGC TATTCCATCT
TTAGAAATAC AACAAAAAAT AGTTGCAATT CTTGATTCAT TTACGGAGCT TACAGCGGAG
CTTACAGCGG AGCTTACAGC GGAGCTTACA GCTCGTAAAA TGCAATATAG TTATTATAGA
GAGAAATTGT ACACCTTTGA TAAAAACAAA GTACAACATT TACCAATGGA TGATGAAAGT
ATTGGAGTGT TTCAAAGGGG TAAACGCTTT GTAAAAACTG ATTTGATTTC TGAAGGAGTT
CCTGTTATTC ATTATGGCGA AATGTATACA CATTACGGAA CTTGGGCAGA TAAAACAAAA
TCCTTTTTGA GTGAAGAACT AGTTAAAAAT AAAAATCTAC GGGTTGCCAA TAAAGGTGAT
GTTGTCATAG TAGCAGCAGG TGAAACTATC GAAGATATCG GAATGGGAAC GGCTTGGTTA
GGTGACGAAG GTGTAGTTGT TCATGATGCA TGTTTTTCAT ATAAAACAAC ATTAAACCCA
AAGTTTGTGG CTTATTTTAC ACGCACAAAA CAATTCCATG ATCAAATTAA AAAACACATT
TCTTCCGGTA AAATTTCTGC TATCAATGCA AATGGTTTAG GTAAAGCAAT AATTCCAGTT
CCTTCAAAAG AAGAACAAGA ACGTGTAGTT TCTATTCTAG ACAAATTTGA TGTTTTAACT
AATTCTATAA GTGAAGGTCT GCCAAAAGAA ATAGAATTAA GAAAAAAACA ATACGAGTAT
TATAGAGACT TGTTACTAAC ATTTCCTAAG AACAATCTAG AATAA
 
Protein sequence
MSYLEKLLNG VEVEWKTVDD IFYIKNGYTP SKSSQEYWTN GTNPWFRMED IRKNGRVLSD 
SIQHVSDSAV KGQLIPENSL LMSTTATIGE HALVLVPYLT NQQITNFSLK TSFIDKVSIK
YLFYCFFDFG KWCIENANKN GGLSIIGTNK LKEYTIAIPS LEIQQKIVAI LDSFTELTAE
LTAELTAELT ARKMQYSYYR EKLYTFDKNK VQHLPMDDES IGVFQRGKRF VKTDLISEGV
PVIHYGEMYT HYGTWADKTK SFLSEELVKN KNLRVANKGD VVIVAAGETI EDIGMGTAWL
GDEGVVVHDA CFSYKTTLNP KFVAYFTRTK QFHDQIKKHI SSGKISAINA NGLGKAIIPV
PSKEEQERVV SILDKFDVLT NSISEGLPKE IELRKKQYEY YRDLLLTFPK NNLE