Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4329 |
Symbol | |
ID | 5090665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5230303 |
End bp | 5233320 |
Gene Length | 3018 bp |
Protein Length | 1005 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743753 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_001196656 |
Protein GI | 146302065 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTA AAAATAAAAG AATAGTCCTG CATCAAATGT GGACTATTAA ATCGCTGGTA TTCATGATTT TCATGCTTTT TCTTTCGGCA GGAATGTTTG CTCAGGGAAA AAAGCTTGTA ACGGGTACCG TTTATGACAA TACGGGTACT GTGCTTCCGG GTGCTTCGGT ATTAGAAACA GGAACCAGAA ACGCAACAAC AACAGATTTT GACGGTAAAT TCACCCTTGA GGTAGCCGTA GGAGGTTCAA TCGAAGTTTC ATTCATCGGA TCATCAACAC AAAAAGTTCA AATTACGGCA TCGACTTCAA AATTAGAAGT TCGTCTGCAA AATGATGGTT ATCAGTTAAA CGAAGTTCAG GTAGTTTCTG TAGGTTATGG AACGCAGAAG AAATCTGATT TAACGGGTGC AATCTCAACT GTTACGGCAG ATAATTTAGT AAAAGGAACA ATTTCTTCTA CAGAGCAGGT TTTGCAGGGA AAAGTTGCCG GATTAAACAT TATCCGTCCT TCTGGAGATC CTGCAGCGGG TTCAACAATC CGTTTACGTG GAGGAACTTC TTTAACAGCA AGCAACAGTC CGCTTATTGT AGTTGACGGT ATTGCAGGTG TTGATATAAA CGTAGTGCAG CCTGCAGATA TTAAATCAGT AGACGTACTT AAAGATGCTT CGGCAACCGC TATTTATGGT TCAAGAGGAG CAAACGGAGT TATTATTATT ACAACAAAAT CAGGTACAAA AGGAGTTTCT GTAGTGTACA ACGGACAGTC CAGCATTGGT TATGTTACAG ATAATTTAGA TCTTTTATCT GCAAACCAAT GGAGAGGTTA TATGCGTGAA ACTGGAAATA AAGATGCTAT TGATTTTGGA GGAAATACAA ACTGGCAGAA AGCGATTGAG CAGACAGCAA TTTCACAATC TCATACTTTA AGCATCAATT CTGGAAAAGC GGACAGTGGT TTTAGAGCTT CTATTGCTTA CCTGAATAAT GAAGGTGTTA TTAAAAAATC AGGTTTAGAA AGATTAAGCG GAAACGTAAA TGCTTACCAA TATCTAGGAG ACAATAAAGA TGTAAAATTC GACATGGGGT TATTTGCTAA TATCGACAAA TGGCACCCTA TTGATTATAG AATTTTTGAG CGTGCTTATA ACTTAAACCC AACTATTCCG GTTTATGATA AGAATGGAAA TTTCACGAAT GTGAATTACA CATTATACGA AAACCCGGTT GAGATTTTAA CTAACAGAAC GGTTGATAAT GAGAGACACA GACTTTTAGG ATATTTTAAA ACAGAGGTTA AATTCTTAAA TGATTTTCAG GCAGTTGCTA ATATTTCATT AGAGCATAAT GCGGCTAAAG GCGGTACTTA CAAACCAACT TATGCTATTA TGGAAGGACG TTCTGAATCT GGTTACGCAC AAAGAACTTA CGAAGAATAT ACAAATGCTC AGGGAGAACT TTATGTAAAT TATTCTAAAG TAATCGACAA ACATAACATC AGCGCTCTTG CAGGGTATTC TTATCTTGAA AATATTTACG AAGGATTTGG CGCACAGCGT TCTGGTTTCG TAACAGATGC TTTTAGTTAT AACAATTTAG GTGCAGGTTC TAATTATCGT TTAGGCGATG TGTATTCATA CAAAGGAAAA TCAAATTTGG TTTCTTTTTA TGCTCGTGCT AACTATGGTT ACGATGGGAA ATACTTACTT ACTGCAACTG TAAGACGAGA TGGTTCAAGC CGTTTTGGAG AAAATAACAA ATGGGGAACT TTCCCATCTG CATCTGCAGC GTGGAGAATC TCTAACGAAA ATTTCATGAG CGGTACAAAA GACTGGTTAA ATTCTTTAAA ATTAAGAGTA GGTTACGGAG TTACAGGTAA TCAGGATGGA ATTGGCGAAT ACAAATCATT ATCAATTTTA GGAGTTGGAA ACGACAGTTA CTACGATCCT GCTACAGGAA GATGGAGTTT AGCATATTCT CCAACACAAA ACCCTAATCC TGATTTGAAA TGGGAATCAA CAAGACAATT AAATATTGGA GTTGATTTTA CTTTATTCGA CAGAATTACG GGATCATTAG AATGGTACCA AAAAAATACT GACGATTTAT TATATACTTA CGAAGTGCCT CAGCCTCCTT ACTTAGTAGG AACAATGCTG GCAAACGTAG GTGAAATGTC AAACAAAGGA GTTGAGTTAA CTTTAAATGC TGATATCGTA AGAGGTGATA AATTTACATG GAATGCAAAT TTAACTTTAG GACACAACGT TCAGAAAATT GAAAAACTTT CAAACCCTAC TTATAAAACT GATGTTATTT ACAGTGGTTC ATTACACGGT TTAGCTGGTA TGTCTGGGCA GTATTCTCAA ATTATTGCCG AAGGATATCC TGTTGGAACT TTCTGGGGAT TCAGAAATGC AGGTCTTGAT GCAAATGGTA AAATACAATA CTACAATGCA GCTGGTGATA TAGTAGCAGA AAATGCTTTA GTTGATGCTG ATAAAACAGA TTTAGGTAAC ATTCAGCCAG ATTTAACTTT AGGTATTGGT ATGAACTTTA CATACAAAAA CTTTGACCTT GGAATTTCTG GATATGGAAT GTTCGGGCAA AAAGCACTTA ATGCGACAAA CATGATGCTT AATGATCCTA ACAGGTTACC TACTTACAAT GTACCAGATG ATTTCTTAGG AAGCGGTATT ACTTCTGCTC CAAAATATTC AGATTACTGG ATTGAAGATG CTTCTTTCTT TAGACTTCAG ACACTTTCAA TAGGATACAC TTTACCATTG AATTTCAAGA ATTCAAAATT AAGAATGTAC ATCATGGGAG AAAACCTTGC TGTATTTACA AAATATAAAG GAGTAGACCC TGAGATTGGA TTAAATGCGC AGGATGGTGT TAATCAAAAC GGAGTGATGG ATAAAACCGG ATTAGCAGGA CCTGGTATAG ACAAGTACAA CAATTATCCT AGACCAACTA CAATTTCTGT TGGATTAAAC TTTACGCTTA ATAACTAG
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Protein sequence | MNSKNKRIVL HQMWTIKSLV FMIFMLFLSA GMFAQGKKLV TGTVYDNTGT VLPGASVLET GTRNATTTDF DGKFTLEVAV GGSIEVSFIG SSTQKVQITA STSKLEVRLQ NDGYQLNEVQ VVSVGYGTQK KSDLTGAIST VTADNLVKGT ISSTEQVLQG KVAGLNIIRP SGDPAAGSTI RLRGGTSLTA SNSPLIVVDG IAGVDINVVQ PADIKSVDVL KDASATAIYG SRGANGVIII TTKSGTKGVS VVYNGQSSIG YVTDNLDLLS ANQWRGYMRE TGNKDAIDFG GNTNWQKAIE QTAISQSHTL SINSGKADSG FRASIAYLNN EGVIKKSGLE RLSGNVNAYQ YLGDNKDVKF DMGLFANIDK WHPIDYRIFE RAYNLNPTIP VYDKNGNFTN VNYTLYENPV EILTNRTVDN ERHRLLGYFK TEVKFLNDFQ AVANISLEHN AAKGGTYKPT YAIMEGRSES GYAQRTYEEY TNAQGELYVN YSKVIDKHNI SALAGYSYLE NIYEGFGAQR SGFVTDAFSY NNLGAGSNYR LGDVYSYKGK SNLVSFYARA NYGYDGKYLL TATVRRDGSS RFGENNKWGT FPSASAAWRI SNENFMSGTK DWLNSLKLRV GYGVTGNQDG IGEYKSLSIL GVGNDSYYDP ATGRWSLAYS PTQNPNPDLK WESTRQLNIG VDFTLFDRIT GSLEWYQKNT DDLLYTYEVP QPPYLVGTML ANVGEMSNKG VELTLNADIV RGDKFTWNAN LTLGHNVQKI EKLSNPTYKT DVIYSGSLHG LAGMSGQYSQ IIAEGYPVGT FWGFRNAGLD ANGKIQYYNA AGDIVAENAL VDADKTDLGN IQPDLTLGIG MNFTYKNFDL GISGYGMFGQ KALNATNMML NDPNRLPTYN VPDDFLGSGI TSAPKYSDYW IEDASFFRLQ TLSIGYTLPL NFKNSKLRMY IMGENLAVFT KYKGVDPEIG LNAQDGVNQN GVMDKTGLAG PGIDKYNNYP RPTTISVGLN FTLNN
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