Gene Fjoh_4313 details

Gene Information

• Locus tag: Fjoh_4313
• ID: 5090649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 5209596
• End bp: 5211398
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 644743737
• Product: TetR family transcriptional regulator
• Protein accession: YP_001196640
• Protein GI: 146302049
• COG category: [I] Lipid transport and metabolism; [K] Transcription; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase; [COG1309] Transcriptional regulator
• TIGRFAM ID: [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACAC GTGAAAATAT TATAGATAAA GCAGATCAAT TTATTCGAAA CAAAGGCTAC 
AATGCCTTTA GTTTTAAAGA TATTTCAAAT GATATAGGCA TAAAAACCGC TTCTATACAT 
TACCACTTCC CTACAAAATC AGATCTTGGT GTAGCGACTA TTAAAGAACA TATTGCCAGA 
TATGAAGTTT TAAAAAAAAA GGTTGCTAAC GAATCTCCAT TAATAAAATT AGAATCTTTT 
TTAGCTGTTC ATACACAAAT TAAACATGAA AATAAAGTCT GCATTGTTGG ATCGCTGGCA 
ACAGACTTAA ATACACTAGA TGAATCAATA AAAGACGAAC TAAAAATATT TGCCAAATTG 
GTGATTGACT GGCTGACTGA AGTTCTGACT GAAGGGAAAG AACAAAATAT ATTTGATTTT 
CAAACTTCTG CAAGAACAAA AGCATTAATG ATAATAACCA ATATGGTAGC AATAGTCCAG 
CTTTCAAGAC TAACAAACGA TGATGATTTT GAATTGGTAA GAGAAACAAT ATTAACAGAA 
TTAAGACCTA AAAAAATAAT GAAAAGAGTT GTAGTAACAG GCTTAGGAGC AGTAACTCCT 
ATTGGCAATA ATGTTCAGGA ATATTGGAAT TCATTAATTA ACGGAGTAAG CGGTGCCGCT 
CCCATAACAA GATTTGACAC CACACAATTT AAAACCAAAT TTGCCTGCGA AGTTAAAAAC 
TTCGATGCTT CGCCTATTTT TGAAAAAAAT GAAATTAGAA AATATGATCT TTTTACACAA 
TATGCTCTGC ATGCAGCAGA CGAAGCTGTA AAAAATGCCA ATATTGATTT TGATACCTTA 
AATAAAAACC GAATTGGAGT AATCTGGGGA TGCGGCGATG GCGGTATTTC TACTTTTGAA 
GAACAATTTG GAGAATATAA ATTAGGAAAC GGCACACCAA GATTTAGTCC GTTTTTTATT 
CCGAAAAGAA TTGTCAATAT TGCTTCAGGT GTTATTTCTA TTAAATATGG TCTTCGCGGT 
ATTAACTATA CAACAGCTGC TGCCTGCTCT GCCAGTAATA CTGCCATTAT CGATGCCTTT 
AACTACATTC GCTGGGGCAA AGCAGATATG ATTATCAGCG GCGGTTCTGA AGCCTCAGTT 
TCAGAATCTT CAATTGGAGG TTTCAATGCT TCAAAAGCAC TGTCAACTTT AAACGAAGAT 
CATAGCAAAG CTTCTCGTCC TTTTGATGTT ACAAGAGATG GATTTGTTTT AGGAGAAGGT 
GCTGGAGTTG TTATCTTAGA AAGCTACGAA CATGCAGTAA AACGAAATGC CGTAATCCTG 
GCCGAAATTG TGGGCGGAGG TTTAGCGGCA GACGCTTATC ACTTAACAGG AACACACCCT 
GAAGGCGAAG GCGCTGTTTT AGGTATGGAA CTTGCTCTTG AGGAAGCCGG AATTACTCCG 
GATAAAATTG ACTATATCAA TGCTCACGCT ACCTCTACTC CAGCGGGTGA CTTAAGCGAA 
CTAAAAGCAA TAGAAAAAGT ATTTGGAATA AATCCTAATG CAAACATTAG TGCTACAAAA 
TCAATGACCG GGCATTTACT TGGAGGCGCG GGAGCAATCG AAGCAGTTGC TTGTATAAAA 
GCGCTTCAGG AAAACATTGT ACCGCCAACT ATAAATACAC AAACAATTGA ACAGGATTAT 
GCTGAAAAAT TTAATCTGAC TCTTGGAAAA GCGCAGGCAA GAGAAGTGAA TTATGCCATG 
AGCAATACTT TTGGTTTTGG CGGACACGTA GCCAGTTCGA TCTTTAAAAA ATTTAAAGAA 
TAA 

 

Protein sequence

MTTRENIIDK ADQFIRNKGY NAFSFKDISN DIGIKTASIH YHFPTKSDLG VATIKEHIAR 
YEVLKKKVAN ESPLIKLESF LAVHTQIKHE NKVCIVGSLA TDLNTLDESI KDELKIFAKL 
VIDWLTEVLT EGKEQNIFDF QTSARTKALM IITNMVAIVQ LSRLTNDDDF ELVRETILTE 
LRPKKIMKRV VVTGLGAVTP IGNNVQEYWN SLINGVSGAA PITRFDTTQF KTKFACEVKN 
FDASPIFEKN EIRKYDLFTQ YALHAADEAV KNANIDFDTL NKNRIGVIWG CGDGGISTFE 
EQFGEYKLGN GTPRFSPFFI PKRIVNIASG VISIKYGLRG INYTTAAACS ASNTAIIDAF 
NYIRWGKADM IISGGSEASV SESSIGGFNA SKALSTLNED HSKASRPFDV TRDGFVLGEG 
AGVVILESYE HAVKRNAVIL AEIVGGGLAA DAYHLTGTHP EGEGAVLGME LALEEAGITP 
DKIDYINAHA TSTPAGDLSE LKAIEKVFGI NPNANISATK SMTGHLLGGA GAIEAVACIK 
ALQENIVPPT INTQTIEQDY AEKFNLTLGK AQAREVNYAM SNTFGFGGHV ASSIFKKFKE