| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4312 |
|---|
| Symbol | |
|---|
| ID | 5090648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5207130 |
|---|
| End bp | 5209400 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644743736 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001196639 |
|---|
| Protein GI | 146302048 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.49569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TATCAAATAA ATCGAAAATT GTTTTTCTTT CTACATTCCC TCCAACACAA
TGTGGAATCG CAACTTATAC TCAAGATACC ATTAAAGGAA TTACCAATGT TTTTGGTAAA
TCGATAACTT GTGAAATTTG CGAATTGGTC GATAAGCCAA AAGCAAACCC AACACAAGCC
TTTACACTAA ATACAAAAGA CAGAGCAGAA TATACAAAAG TTGCCGAAGA AATCAATAAA
GATAAGAATG TGAAATTAGT TCACATTCAG CATGAATTTG GTTTATTTGG AGGAAATTAC
GGAGATCATT TGCTAGATTT TTTAAATACT GTAAAAAAAC CGGTTACTTA TACTTTTCAC
AGCGTTATTC CTAATCCAAA TGAGGAATTA AAAACCTTTG TAAAATTACT TTTAAGCTAC
AGCAATTCTG TTTTTGTAAT GACTAACCAG TCAAAAGAAA TTTTGATAAA AGACTACGAT
GTTAATGAAG AAATAATTAC TTGTGTACAA CATGGAACTC ATATTGTAAT CTATGAAACT
CCGGAACAGG CAAAAGCTAA ATTCGATATT CAAAACAAAA TTGTATTATC AACTTTTGGA
CTTTTGGGTG AAGGTAAAAA CATCGAAACC GGTTTACAGG CTTTGGCAAA AATCGTCAAA
AAAGAACCAG ATGTATTGTA CCTGATTATT GGCAAAACGC ATCCAAATTT AATTAAAGAC
GGTGTTGATG TTTATCGCGA TAAATTGGAA GCACTTGTTG ATGAATTAGA TTTACGCAAA
AATGTTCGTT TCATCAATCA ATATTTAGAT ACTGAAGAAC TTTTAGAATA TTTAAAAGCT
ACTGATATTT ATTTATTTAC ATCAAAAGAT CCAAACCAGG CTGTAAGCGG CACTTTTGCT
TATGCTATGA GCTGTGCATG TCCAATGGTG GCATCAAAAA TTCCGCACAC AAGAGAAGTT
TTAACCGAAG ACTGTGGTGT GTTAGTTGAT ATTGGAGATG TCGATCAATT TGCAGAACAA
ACCTTAAAAT TAATTGCCGA CGAAAATTTA AGACATGAAA TGGGAATTCA GGCTTTTACC
AAAATGAGAG CTTCATCTTG GGAAAATGCT GCATTAACAC ACATGAATAC GTATAAAAAA
CTAATTGAAA ATCCAGCTGA TATTAAATAC AGCTATCCGG ATATTCAATT AAGACATATC
AAAAAATTAA CTACAGATCT TGGTATTATC CAGTTTAGTA AAATCTCAGT TCCAGATTTG
GAGTCAGGAT ATACATTAGA TGATAATGCA CGTGCTTTAA TTGCATTCTG CATGCATTAC
AAATTAACAA GAGACAAAGA CGATCTTCCT TATATTTTAA TTTACCTGGA TTTCATCGAA
AGATGCCAGA AACCAAAAGG AAACTTCATC AATTACGTAG ATCAGGAATA TCGTGAACAC
GTTGAACAAA ATGCCGAAGT TAACCTTGAA GATTCTAATG CAAGAGCAAT TTGGGCTTTG
GGAACAGTTG TGGCAAATGC TGATATTCTT CCTGAAAATA TTTCAAAAAA AGCATCAAAA
TGTTTCCTTA ACTCATTAAA ATGGGCCGAA AATATCCAGT CGCCTCGTTC TATTGGTTTC
GCTACAAAAG GTTTGTATCT GTATCACAAT GCTATTCCAA ACTTATATGT TGCGGCCATT
ATCAACAAGC TGAATGCTAA ACTGCTTGCA AATTATGAAG ACACTGCTTC TGAAGACTGG
CAATGGTTTG AAAACTATTT AACATACGGA AACGGTATTC TGCCAGAATC AATGTTATAT
GCTTATTTAG TAACCAATAA ACCGGTTTAC AAAAAAGTTG CACTAGATTC ATTAGATTTC
TTAATGTCTA AAACTTTTAT CGATGGTAAT TTCAAAGCCA TTTCAAACCA AAGCTGGTAT
CATAAAGGTT CTGAACCACA GGAATACGGA GAACAGCCAA TTGATGTTAC TTATACAATC
CAGACTTTAA ATGCTTTTTA CCAAGCCTTT AAAACTCCGG AATATAAAAA GAAAATGAAA
ACTGCATTTA ACTGGTTCTT AGGAAAAAAT CATTTAAATC AAATTATGTA CAATCCGGTA
AGCGGAGGCG GTTACGATGG TCTTGAAAAA GAAAACGTAA ACTTAAATCA AGGAGCAGAA
TCAACTGTCT GCTATTTAAC CGCAAGATTA TTAATGGAAA AATTTGCACT TTCAGAGTCT
AAGGTTATTC CCTTAATAAA ATCCAGAACT GGTATTGCTA TAAACTTATA A
|
|---|
| Protein sequence | MKKISNKSKI VFLSTFPPTQ CGIATYTQDT IKGITNVFGK SITCEICELV DKPKANPTQA
FTLNTKDRAE YTKVAEEINK DKNVKLVHIQ HEFGLFGGNY GDHLLDFLNT VKKPVTYTFH
SVIPNPNEEL KTFVKLLLSY SNSVFVMTNQ SKEILIKDYD VNEEIITCVQ HGTHIVIYET
PEQAKAKFDI QNKIVLSTFG LLGEGKNIET GLQALAKIVK KEPDVLYLII GKTHPNLIKD
GVDVYRDKLE ALVDELDLRK NVRFINQYLD TEELLEYLKA TDIYLFTSKD PNQAVSGTFA
YAMSCACPMV ASKIPHTREV LTEDCGVLVD IGDVDQFAEQ TLKLIADENL RHEMGIQAFT
KMRASSWENA ALTHMNTYKK LIENPADIKY SYPDIQLRHI KKLTTDLGII QFSKISVPDL
ESGYTLDDNA RALIAFCMHY KLTRDKDDLP YILIYLDFIE RCQKPKGNFI NYVDQEYREH
VEQNAEVNLE DSNARAIWAL GTVVANADIL PENISKKASK CFLNSLKWAE NIQSPRSIGF
ATKGLYLYHN AIPNLYVAAI INKLNAKLLA NYEDTASEDW QWFENYLTYG NGILPESMLY
AYLVTNKPVY KKVALDSLDF LMSKTFIDGN FKAISNQSWY HKGSEPQEYG EQPIDVTYTI
QTLNAFYQAF KTPEYKKKMK TAFNWFLGKN HLNQIMYNPV SGGGYDGLEK ENVNLNQGAE
STVCYLTARL LMEKFALSES KVIPLIKSRT GIAINL
|
|---|
| |