| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4301 |
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| Symbol | |
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| ID | 5090637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5199399 |
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| End bp | 5200817 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644743725 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001196628 |
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| Protein GI | 146302037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.123018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC ATATAACCAA AATCGTGACC TTCGCCATTC TGATCACGAC TTTAATATCC
TGTAAAGTCT CAAAGGATAT TGAAACTCCA AAAGATGCAT TTCCTGAGAA TTTCAGGAAT
GCATCGGTTT CGAGTGATAC AACCAGTATT GCCGATGTGG AGTGGAAAAA CTTCTTTACA
GAAAAAGATA TTATAAAATT AATTGACAGC GCCGTTGCAA GAAACAACGA CCTTCAGATT
GCCGAAAAGA ACATCGAAAT TGCCCAATAC CGTTTTACAC AATCAAAATG GGGAAATGTG
CCTCAGGTTA ACTTATTTGT AAACGCAAGC ACAAGCAATC CGTCTGACAA TAGTTTTACG
GGATTGAACT TAAATCAAGC AATTGGTGCT AAACATATTG ACGACTATTC TGCTGGAGCT
TCTCTTTCTT GGGAAGCTGA TATTTGGGGA AAGATCAGAA ACCAAAAGAA AGGGGCTTAC
GCAGGATATC TTCAATCTGA AGAAGTAAAA AAAGCATTGC AGACTAATAT TGTCGCTAAT
GTTTCTAGAG GATATTATAA TCTTTTGATG CTGGATGCGC AATTGGATAT TGCCAGACAA
AATCTTCGTT TAAATGATAG TACAACCAAT ATTATCAAAT TAAAATACGA TGCCGGTCAG
GTAACTACTT TAGCAATTCA ACAATCGGAA GCACAGAAAT TAAACTCAGC GCAATTGATT
CCGTTATTGG AACAAAATAT TGCCATTCAG GAAAATGCTT TGAGTGTTTT AACAGGTTCT
TTTCCAAATT CAAAAGAAAG ATCTACTCAA TTAAGTGCGA TTGAAGTAAA ACACAATACA
GCAATTGGAG TTCCATCTGC CTTAGTAAGC AGAAGACCTG ATGTAAAAAG TGCCGAATTG
GCGCTAAAAG CTGCCAACGC AAATGTCGGT ATCACGAAAG CGGATTTATA CCCAGCTCTC
AGAATTACGG CTCAAGGCGG CGTAAACTCT TTCGAAACCA GTAATTGGTT CAACATTCCG
GCTTCATTGT TTGGAACTGT TGCGGGCGGA TTAACGCAGC CTCTTTTAAA TAACAAAAGA
GTAAGAACGC AATATAATAT CGCTGTCGCA GAAAGAGAAA AAGCTGTTTT AAGTTTTAGA
CAATCTGTTT TGGTTGCTGT AAGCGAAGTT TCTGATGCTT TGGTTAAAGT AGAGAAATTA
CAACAGCAGG AAACTTTCTT AAAAGAAAAA GTAAAAACGC TGCAGCAAGC GATTAAAAAT
GCCAATCTTT TATTTAAAAA TGGTATGGCA GAATATCTTG AAGTTTTAAC GGCACAGGCA
AATTTATTGC AAAGCGAACT AGAACTTGCT GATATCAAAA GACAACAACT TACAGCCAAT
ACAGATTTGT ACCGCGCTCT AGGCGGAGGC TGGAAATAA
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| Protein sequence | MKNHITKIVT FAILITTLIS CKVSKDIETP KDAFPENFRN ASVSSDTTSI ADVEWKNFFT
EKDIIKLIDS AVARNNDLQI AEKNIEIAQY RFTQSKWGNV PQVNLFVNAS TSNPSDNSFT
GLNLNQAIGA KHIDDYSAGA SLSWEADIWG KIRNQKKGAY AGYLQSEEVK KALQTNIVAN
VSRGYYNLLM LDAQLDIARQ NLRLNDSTTN IIKLKYDAGQ VTTLAIQQSE AQKLNSAQLI
PLLEQNIAIQ ENALSVLTGS FPNSKERSTQ LSAIEVKHNT AIGVPSALVS RRPDVKSAEL
ALKAANANVG ITKADLYPAL RITAQGGVNS FETSNWFNIP ASLFGTVAGG LTQPLLNNKR
VRTQYNIAVA EREKAVLSFR QSVLVAVSEV SDALVKVEKL QQQETFLKEK VKTLQQAIKN
ANLLFKNGMA EYLEVLTAQA NLLQSELELA DIKRQQLTAN TDLYRALGGG WK
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