Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4264 |
Symbol | |
ID | 5092306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5150530 |
End bp | 5151369 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743688 |
Product | 5-keto-4-deoxyuronate isomerase |
Protein accession | YP_001196591 |
Protein GI | 146302000 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.968678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT ATAGTTCAAG ATACGCGTCA AGTCCAGAAG CTGTAAAAAA ATATGATACA CAACAATTGA GAGAAGAATT CTTAATTGAT GATTTAATGC AGGAAGATGA AGTTGTATTA GTTTATTCTC ATTACGACAG ATATATTGCA GGATCTGCAG TACCAGTAAA AGGAGATTTA GTTTTAGAAA CTATTGATCC CTTAAAAGCA CCATATTTTT TAGAAAGAAG AGAGCTTGGA ATTATTAATG TAGGAGGAAG CGGTTCTGTG GTTGTTGAAG GAACCACTTA TGAATTAGGA TTTAAAGATG CTTTATACAT TGGAGCTGGA AATAAAGAGG TGGTTTTTAA AAGTGATGAC AAAAACAATC CTGCTAAGTT CTATTTAAAC TCTGCACCAG CACACACAAC TTATCCAACT AAGAAAGTAA GTTTAGCTGA AGCGAATAAA TTACAATTGG GTACAATGGA AACGGCAAAT CACCGTACCG TTAACCAAAT GATTATTGGA AGTGTTGTTA CTACCTGTCA ATTACAAATG GGAATGACAG AATTAAAACC AGGAAGCGTT TGGAACACTA TGCCGGCTCA CGTTCACGAC CGTAGAATGG AAGTTTATTT CTATTTAGAT ATTCCGCAAG ATCAGGCAGT TTGCCACTTC ATGGGGCAAC CGCAAGAAAC GAGACATATC TGGATGAACA ATCATCAGGC CGTAATTTCG CCGCCTTGGT CAATTCACTC AGGTTCAGGA ACCAGCAACT ATACTTTTAT CTGGGGAATG GCTGGTGAAA ACTTAGATTA CGGAGATATG GACGTTTGTA AAATCACTGA TTTAAGATAA
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Protein sequence | MTKYSSRYAS SPEAVKKYDT QQLREEFLID DLMQEDEVVL VYSHYDRYIA GSAVPVKGDL VLETIDPLKA PYFLERRELG IINVGGSGSV VVEGTTYELG FKDALYIGAG NKEVVFKSDD KNNPAKFYLN SAPAHTTYPT KKVSLAEANK LQLGTMETAN HRTVNQMIIG SVVTTCQLQM GMTELKPGSV WNTMPAHVHD RRMEVYFYLD IPQDQAVCHF MGQPQETRHI WMNNHQAVIS PPWSIHSGSG TSNYTFIWGM AGENLDYGDM DVCKITDLR
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