Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4260 |
Symbol | |
ID | 5092302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5146425 |
End bp | 5147093 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743684 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_001196587 |
Protein GI | 146301996 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAT ATTCAAGAAT AGAGGTTGCG CAGACAATGA AAGATAACGG AATGGTGCCG TTGTTTTTTC ATTCTGATAT TGAATTAAGT AAAAAAGTTT TAAAAGCTTG TTATGACGGT GGTTCCCGAT TAATGGAATT TACCAGCAGA GGTGATTTTG CACATGAAGT TTTTGGAGCT TTAAATAAAT ACGCTTTAGC AGAACTTCCG GGAATGATCT TAGGAGTTGG TTCTGTTACA GATGCAGCTT CGGCGTCATT ATACATGAGT TTAGGAGCTA ATTTTATTGT AACTCCAGTA TTTAGAGAAG ACATTGCAAT TGCCTGCAAC CGCCGAAAAG TATTATGGTC TCCTGGATGT GGTACGCTTA GCGAAATTGC AAGAGCGGAA GAATTAGGCT GTGAAATTGT AAAATTATTT CCGGCAGATA CTTACGGACC AGAATTTATA AAAGCCATAA AAGGACCATG CCCGTGGACA AACATTATGC CTACAGGCGG TGTTTACCCA ACTGTTGAAA GTTTGAGTTC ATGGCTTAAC GCAGGGGCAA CCTGTGTTGG TTTAGGTTCA CAATTAATTT CAAAAGATAT ATTAGACAAA AAAGACTTTG ACGGTTTAAC AGCTAAAGTA AGTCAGGTTC TTGACATCAT AAAAAATATA AGAAAATAA
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Protein sequence | MAKYSRIEVA QTMKDNGMVP LFFHSDIELS KKVLKACYDG GSRLMEFTSR GDFAHEVFGA LNKYALAELP GMILGVGSVT DAASASLYMS LGANFIVTPV FREDIAIACN RRKVLWSPGC GTLSEIARAE ELGCEIVKLF PADTYGPEFI KAIKGPCPWT NIMPTGGVYP TVESLSSWLN AGATCVGLGS QLISKDILDK KDFDGLTAKV SQVLDIIKNI RK
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