Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4258 |
Symbol | |
ID | 5092300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5143106 |
End bp | 5144728 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743682 |
Product | Altronate dehydratase |
Protein accession | YP_001196585 |
Protein GI | 146301994 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.350711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGCGC AGAAAAAATT GATAAAAGTT CACCCAACCG ACAATGTAGC GGTTGCTTTG GTGGATCTTA CAGCAGGCGA AGTAATTGAT TTCGAAGGAG AATCAGTTAC AGTTGAGTCT GATGTAAAAA TGAAACATAA GATTGCAATG GTTCCTTTTA ATGTAGGGGA CAGAATCATT ATGTACGGAG TTTTAGTAGG TAAAGCAAGT GCAAGAATCG AAAGAGGAGG ATTGCTTTCT ACTGCAAATG TAAAACACGA AAGCGATAAA GTTACTGGTA AAACAGAAAC TATTGGCTGG AATGCTCCAA ATATTGATAA ATGGAAAGAC AGAACGTGGC AGGGTTATCA CAGAGAAGAC GGACAAGTTG GAACTGAAAA TGTTTGGTTA TTCTTCCCGT TAGTATTTTG TGAAAACAGA AACATCGAAA TCTTAAAAGA TATTTTTGAG AAAGAATTGA TGAAACCAAA AGAAAACGAT TATCAGTTAT TGTTACGTTC TTTGGTAAAA TCAGAAACAG GAGGAGCAGG AAATCAGGAA GCTTCAAATG ATGCGAATTT ATTCAACAAT ATTCAGGTAA AATTCATTAC ACACCAAGGC GGTTGCGGCG GAATTCGTCA GGATTCTCAT AGTCTGGCTA AATTATTAGC TGGTTATGTA AACAATCCAA ACGTTGCCGG AGCGACAGTT TTGAGTTTAG GATGCCAGAA TCTTCAAATT TCGATTTTTA AAGATGCTTT AGACGCGATC AATCCAAACA GTAAAAAACC TGTTTTAATC TATGATCAGC AGTCAATTGG AACTATCGAA ACGATGTTAA GCAGTGTTGT AAAAGATACT TTTGAAGCGA TTAAAAAAGC AAACGAAATT AAGAGAGAAC CAGCTCCATT ATCTAAATTA AGAATTGGTT TAGAGTGCGG TGGATCTGAC GGATTCTCTG GAATTTCTGC AAACCCTACT TTAGGAGTAA CTTCAGATTT ATTGGCTGCT TTAGGCGGTA CTACAATTCT TTCTGAGTTT CCTGAATTAT GTGGTGTTGA GCAGGAATTA GTAAACCGTT GTGTTGAAGA CGAGAGCGGA AAACGTTTCT TAGACTTAAT GCAGTGGTAT GAAAAAACTG TTGTTGATGC TGGTTCAGGA TTTGATATGA ATCCTTCTCC GGGTAATATT AAAGATGGTT TAATTACAGA TGCAATGAAA TCTGCAGGTG CAGCTAAAAA AGGTGGAACT TCACCTATTA CCGGAGTATT CGATTACGGT GAATATATCA CTAAGCCAGG TTTAACTTTG CTTTGTACGC CAGGAAATGA TGTTGAGTGT ACAACTGCAA TGGTAGGTTC TGGTGCTAAT ATGGTATTGT TTACAACAGG TTTAGGAACA CCAACAGGAA ACCCAATTGC TCCGGTTGTA AAAATTTCAT CAAACACTCA ATTAGCAAAC AAAATGTCAG ATATTATCGA TATTGACACT GGAGGTATTA TTACTGGTGA AAAATCAATC GATGAAATGG CAGATGAAAT GTTAGAGTTT ATTATTGATG TTGCCAGCGG AACAATTAAA ACCAAAGCGG CACTTTTAAA TCAAAACGAC TTTATTCCTT GGAAAAGAGG AGTTTCGCTT TAG
|
Protein sequence | MAAQKKLIKV HPTDNVAVAL VDLTAGEVID FEGESVTVES DVKMKHKIAM VPFNVGDRII MYGVLVGKAS ARIERGGLLS TANVKHESDK VTGKTETIGW NAPNIDKWKD RTWQGYHRED GQVGTENVWL FFPLVFCENR NIEILKDIFE KELMKPKEND YQLLLRSLVK SETGGAGNQE ASNDANLFNN IQVKFITHQG GCGGIRQDSH SLAKLLAGYV NNPNVAGATV LSLGCQNLQI SIFKDALDAI NPNSKKPVLI YDQQSIGTIE TMLSSVVKDT FEAIKKANEI KREPAPLSKL RIGLECGGSD GFSGISANPT LGVTSDLLAA LGGTTILSEF PELCGVEQEL VNRCVEDESG KRFLDLMQWY EKTVVDAGSG FDMNPSPGNI KDGLITDAMK SAGAAKKGGT SPITGVFDYG EYITKPGLTL LCTPGNDVEC TTAMVGSGAN MVLFTTGLGT PTGNPIAPVV KISSNTQLAN KMSDIIDIDT GGIITGEKSI DEMADEMLEF IIDVASGTIK TKAALLNQND FIPWKRGVSL
|
| |