Gene Fjoh_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4258 
Symbol 
ID5092300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5143106 
End bp5144728 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content37% 
IMG OID644743682 
ProductAltronate dehydratase 
Protein accessionYP_001196585 
Protein GI146301994 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.350711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGC AGAAAAAATT GATAAAAGTT CACCCAACCG ACAATGTAGC GGTTGCTTTG 
GTGGATCTTA CAGCAGGCGA AGTAATTGAT TTCGAAGGAG AATCAGTTAC AGTTGAGTCT
GATGTAAAAA TGAAACATAA GATTGCAATG GTTCCTTTTA ATGTAGGGGA CAGAATCATT
ATGTACGGAG TTTTAGTAGG TAAAGCAAGT GCAAGAATCG AAAGAGGAGG ATTGCTTTCT
ACTGCAAATG TAAAACACGA AAGCGATAAA GTTACTGGTA AAACAGAAAC TATTGGCTGG
AATGCTCCAA ATATTGATAA ATGGAAAGAC AGAACGTGGC AGGGTTATCA CAGAGAAGAC
GGACAAGTTG GAACTGAAAA TGTTTGGTTA TTCTTCCCGT TAGTATTTTG TGAAAACAGA
AACATCGAAA TCTTAAAAGA TATTTTTGAG AAAGAATTGA TGAAACCAAA AGAAAACGAT
TATCAGTTAT TGTTACGTTC TTTGGTAAAA TCAGAAACAG GAGGAGCAGG AAATCAGGAA
GCTTCAAATG ATGCGAATTT ATTCAACAAT ATTCAGGTAA AATTCATTAC ACACCAAGGC
GGTTGCGGCG GAATTCGTCA GGATTCTCAT AGTCTGGCTA AATTATTAGC TGGTTATGTA
AACAATCCAA ACGTTGCCGG AGCGACAGTT TTGAGTTTAG GATGCCAGAA TCTTCAAATT
TCGATTTTTA AAGATGCTTT AGACGCGATC AATCCAAACA GTAAAAAACC TGTTTTAATC
TATGATCAGC AGTCAATTGG AACTATCGAA ACGATGTTAA GCAGTGTTGT AAAAGATACT
TTTGAAGCGA TTAAAAAAGC AAACGAAATT AAGAGAGAAC CAGCTCCATT ATCTAAATTA
AGAATTGGTT TAGAGTGCGG TGGATCTGAC GGATTCTCTG GAATTTCTGC AAACCCTACT
TTAGGAGTAA CTTCAGATTT ATTGGCTGCT TTAGGCGGTA CTACAATTCT TTCTGAGTTT
CCTGAATTAT GTGGTGTTGA GCAGGAATTA GTAAACCGTT GTGTTGAAGA CGAGAGCGGA
AAACGTTTCT TAGACTTAAT GCAGTGGTAT GAAAAAACTG TTGTTGATGC TGGTTCAGGA
TTTGATATGA ATCCTTCTCC GGGTAATATT AAAGATGGTT TAATTACAGA TGCAATGAAA
TCTGCAGGTG CAGCTAAAAA AGGTGGAACT TCACCTATTA CCGGAGTATT CGATTACGGT
GAATATATCA CTAAGCCAGG TTTAACTTTG CTTTGTACGC CAGGAAATGA TGTTGAGTGT
ACAACTGCAA TGGTAGGTTC TGGTGCTAAT ATGGTATTGT TTACAACAGG TTTAGGAACA
CCAACAGGAA ACCCAATTGC TCCGGTTGTA AAAATTTCAT CAAACACTCA ATTAGCAAAC
AAAATGTCAG ATATTATCGA TATTGACACT GGAGGTATTA TTACTGGTGA AAAATCAATC
GATGAAATGG CAGATGAAAT GTTAGAGTTT ATTATTGATG TTGCCAGCGG AACAATTAAA
ACCAAAGCGG CACTTTTAAA TCAAAACGAC TTTATTCCTT GGAAAAGAGG AGTTTCGCTT
TAG
 
Protein sequence
MAAQKKLIKV HPTDNVAVAL VDLTAGEVID FEGESVTVES DVKMKHKIAM VPFNVGDRII 
MYGVLVGKAS ARIERGGLLS TANVKHESDK VTGKTETIGW NAPNIDKWKD RTWQGYHRED
GQVGTENVWL FFPLVFCENR NIEILKDIFE KELMKPKEND YQLLLRSLVK SETGGAGNQE
ASNDANLFNN IQVKFITHQG GCGGIRQDSH SLAKLLAGYV NNPNVAGATV LSLGCQNLQI
SIFKDALDAI NPNSKKPVLI YDQQSIGTIE TMLSSVVKDT FEAIKKANEI KREPAPLSKL
RIGLECGGSD GFSGISANPT LGVTSDLLAA LGGTTILSEF PELCGVEQEL VNRCVEDESG
KRFLDLMQWY EKTVVDAGSG FDMNPSPGNI KDGLITDAMK SAGAAKKGGT SPITGVFDYG
EYITKPGLTL LCTPGNDVEC TTAMVGSGAN MVLFTTGLGT PTGNPIAPVV KISSNTQLAN
KMSDIIDIDT GGIITGEKSI DEMADEMLEF IIDVASGTIK TKAALLNQND FIPWKRGVSL