Gene Fjoh_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4251 
Symbol 
ID5092293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5131763 
End bp5132968 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content35% 
IMG OID644743675 
Productglycosy hydrolase family protein 
Protein accessionYP_001196578 
Protein GI146301987 
COG category[R] General function prediction only 
COG ID[COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.166912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA AAAGCCATTT TAGTTTTGCC CAAATCATGC TTATAAGTAT GATGCTGTTT 
TCATTGAATG CACTTTTGGC ACAATCCTCA AATACCATTT CAAAAGATTT AAAATGGTCA
GAGCGAATGG CACTTTCTGT TATCAAACGT GCTCCGCAGG CCTGGCAGGT CGACAATAAC
GAAAAACCAA AATGGGATTA TAAATTAGGT CTTTTGATGA CTTCTTTTGA AAAACTGTAT
CAAAAAACAA ATAATCCTGT TTATGCAGAT TACATCAAAG CATACGGAGA AACAGTAATT
AATCCTTTGG GAGAAATTAT GAATTACAAA CTTGAAGATT ATAATATCGA TTATGTAAAT
CCGGGTAAGT TTTTGTTTGA TCTTTATAAA AGAACAAACG ACAATCGTTA TTTAACAGCA
TTACAGACTT TAAGAAAGCA ATTAGAAACC CATCCAAGAA CAAATTCAGG AGGATTTTGG
CATAAAAAAA TATACCCGTA TCAAATGTGG CTTGACGGTT TGTATATGGG AACGCCTTTC
TATGCACGCT ACACAGTAGA ATTTGATAAT GGAAAAGATT TAGATGATGT TGCTAAACAA
TTCGAACAAA TACATCTGCA TACGCTCGAT AAAAATACCG GACTGCTTTT TCATGCCTGG
GATGAAAGCA AACAGATGCC GTGGGCGAAT AAAGAAACGG GAGTTTCACC CAATTTCTGG
TCACGTTCTA TTGGCTGGTA TATGATGGCT TTGGTTGATG TTTTGGATTA CATGCCAAAA
GAACATCCAA AAAGAAAAGA ACTCATTCAG TATCTAAATG ATATTTCAAA AGCTGTGGCA
AAATATCAGG ACAAATCAGG ATTGTGGTAT CAGGTTACAG ATGCGGGAAA TAAAGAAGGA
AATTACCTTG AAGCTTCGGG ATCTGAAATG TTTGTTTACG CTTTCGCGAA AGGAGTAAAC
AAAGGATATT TACCGGCAAA GTATAAAAAA TTAGCTAAAA AAGGTTTTAA TGGCATAACT
GAAAAACTAA TAAAAGTTGA TGCAGACGGT GAAATTCATA TTACACAGGT TTGTGCCAGT
GCAGGTTTAG GAGGAAATCC ATACCGAGAC GGTTCTTTTG AATATTATAT TAAGGAAAAA
ATAAAAATAG ACAACTCACA CGGATTAGGG CCTTTTATTC TGGCCGCATT AGAAGTAGAA
AAATAG
 
Protein sequence
MIKKSHFSFA QIMLISMMLF SLNALLAQSS NTISKDLKWS ERMALSVIKR APQAWQVDNN 
EKPKWDYKLG LLMTSFEKLY QKTNNPVYAD YIKAYGETVI NPLGEIMNYK LEDYNIDYVN
PGKFLFDLYK RTNDNRYLTA LQTLRKQLET HPRTNSGGFW HKKIYPYQMW LDGLYMGTPF
YARYTVEFDN GKDLDDVAKQ FEQIHLHTLD KNTGLLFHAW DESKQMPWAN KETGVSPNFW
SRSIGWYMMA LVDVLDYMPK EHPKRKELIQ YLNDISKAVA KYQDKSGLWY QVTDAGNKEG
NYLEASGSEM FVYAFAKGVN KGYLPAKYKK LAKKGFNGIT EKLIKVDADG EIHITQVCAS
AGLGGNPYRD GSFEYYIKEK IKIDNSHGLG PFILAALEVE K