| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4250 |
|---|
| Symbol | |
|---|
| ID | 5092292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 5130520 |
|---|
| End bp | 5131713 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644743674 |
|---|
| Product | glycosy hydrolase family protein |
|---|
| Protein accession | YP_001196577 |
|---|
| Protein GI | 146301986 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.478117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTTT TATTAGTTTG CGTAATGGCT TTAACAGGCT GTAAAGTAAC TTCACAAGAA
ACGGCAAAAA AAGAAATCGT TATTTCGAAA GACATGAAAT GGTCAGATAA AATGGCTTTA
ACTTTAATGA AACGTCATCC AGAAAGCTAT ATGCTTGATG ATGCCAAAAA GCCAAAATGG
GATTATGTTC ATGCCTTGGT CCTGCATTCA ATTGAAGAAT TAAACAAGAA AAATCCAGAT
CCGCGTTACA AAGCTTACAT AAGAGGTTAT GTAGATGAAT TAGTGCAGGA AGACGGAACA
ATTAAAACCT ACGAACTAGA CAAATACAAT ATAGATTTAG TGGTTCCGGG ACGTCTGCTT
TTTGCTATTT ATGCGGAAAC TAAACAGGAT AAATATTTAA AAGCAATGCA GCTGGTTCGC
CAGCAGTTAA CAGAACAGCC TCGTACTGCG AGCGGCGGTT TCTGGCACAA ACAAATCTAT
CCAAACCAAA TGTGGTTAGA CGGTTTGTAT ATGGGAGAAC CATTCTATGC AGAATATACT
GCGGCATTTG AAAACGGAAA AAGTTTTGAT GATATCGCAA AACAATTTGA ATTAATTCAG
TTGCATGCAA CAGATCCAAA AACAGGATTA TTATACCACG GATGGGATGA AAGCAAAGCA
ATGCCGTGGG CAAATAAAGA AACAGGAAAT TCTCCAAATT TCTGGTCTAG AGCTTTAGGA
TGGTATGTAA TGGCATTAGT AGATGTTTTA GATTATTTCC CAAAAGATCA CCCAAAAAGA
CCAGAGCTGA TAAAATACTT AAACAACGCA TCTGCAGCTT TGGCAAAATA TCAGGATAAA
TCTGGATTGT GGTATCAGGT TACAGACAAA GGAGGAGAAA AAGGAAATTA CTTAGAAGCT
TCAGGATCTG CTATGTTTGC GTATGCTTTT GCAAAAGGAG CAAACAAAGG ATATTTACCA
TCAAAATATA AAAAACTGGC TAATAAAGCG TTTGACGGAT TAACAACAGT TTTAATTAAA
AAAGTAGACG AAGATGGCGG GATTACTTTA ACAAACTGCT GTCAGGTTGC AGGTTTAGGA
GGAACTCCAT ATCGTGATGG TTCTTATGAA TATTATGTAA ACGAAAGAAA AAAAGATAAC
GACCCTAAAG CAACTGGTCC TTTTATTTTG GCAGCTTTAG AATTGAATAG ATAG
|
|---|
| Protein sequence | MSVLLVCVMA LTGCKVTSQE TAKKEIVISK DMKWSDKMAL TLMKRHPESY MLDDAKKPKW
DYVHALVLHS IEELNKKNPD PRYKAYIRGY VDELVQEDGT IKTYELDKYN IDLVVPGRLL
FAIYAETKQD KYLKAMQLVR QQLTEQPRTA SGGFWHKQIY PNQMWLDGLY MGEPFYAEYT
AAFENGKSFD DIAKQFELIQ LHATDPKTGL LYHGWDESKA MPWANKETGN SPNFWSRALG
WYVMALVDVL DYFPKDHPKR PELIKYLNNA SAALAKYQDK SGLWYQVTDK GGEKGNYLEA
SGSAMFAYAF AKGANKGYLP SKYKKLANKA FDGLTTVLIK KVDEDGGITL TNCCQVAGLG
GTPYRDGSYE YYVNERKKDN DPKATGPFIL AALELNR
|
|---|
| |