| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4236 |
|---|
| Symbol | |
|---|
| ID | 5092278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5104517 |
|---|
| End bp | 5105641 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644743655 |
|---|
| Product | glycosy hydrolase family protein |
|---|
| Protein accession | YP_001196563 |
|---|
| Protein GI | 146301972 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.957532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAATTTCACT TTTAGCCGTC TCCATTTTTT ACACTTCGAG TCTTTCTGCA
CAAGAACCAT TTGATAAAAA ATTGGTTTTA AAGCAAATGA TGCTTGCCAA TGATTATTTT
ATGCAAAAAT GGCCCGACAC AGGAAAAACA ATTATTACCA ATAAAGAACG TCCTAGTAAT
ATCTGGACGC GCGGGGTTTA TTATGAAGGA TTAATGGCAC TGCATGAAAT TTTACCAAAA
GAAGCATATT ATGATTATGC TTATGCTTGG GCTGAATTTC ACAAATGGGG ATTTAACGGC
GGCAACGTAA CCCGAAATGC TGATAATTAC TGTGCAGCTC AGACCTATAT TGATTTGTAC
AATTTAGAAC CTGATGCTAA AAAACTTAAA AACACAAAGG CAAATATAAA CATGCTTCTC
AACACGCCTC AGCTAAATGA CTGGTCATGG ATTGATGCCA TACAAATGGG AATGCCTGTT
TTTGCCAAAA TGGGAGTGTT AGAGAAAAAC AATCGTTATT TCGAAAAAAT GTACGACATG
TATATGTTTT CACGAAACAA ACACGGCGAT AATGGTTTAT ACAATCCTAA AGAAGGCTTA
TGGTGGCGTG ATGCGGATTT TGATCCCCCG TATAAAGAAC CTAACGGCAA AAACTGTTAT
TGGAGCCGTG GTAACGGATG GGTTATTGCC GCTCTGGCAA AAGTTTTAAC TATTATTCCT
GAAAATGCAC CGCACAGGGA ACAATATGTA AAAGATTTAA AAGCTATGGC TGGAGCACTG
GTTTCTATTC AAAGAGTTGA TGGTTTTTGG AATGTAAGCT TACACGATCC ATCAAATTTT
GGTGAAAAAG AAACATCCGG AACCGCTTTA TTTATTTATG GAATGGCGTA CGGAATAAAC
AGCGGGATTT TGAAAAAAGA AACCTATTTA CCTGTTATTC AAAAAGCATG GAATGCTATT
ACAACCGAAA GTCTGCACAC AAACGGTTTT TTAGGTTACC TGCAGTCGAC TGGAAAAGAA
CCAAAAGACG GACAACCTTT GTCTTACGAC AAAATTCCTG ATTTTGAAGA TTATGGTTTA
GGCTGTTTTT TATTGGCCGG ATCAGAAATT TATAAATTAA AATAA
|
|---|
| Protein sequence | MKKLISLLAV SIFYTSSLSA QEPFDKKLVL KQMMLANDYF MQKWPDTGKT IITNKERPSN
IWTRGVYYEG LMALHEILPK EAYYDYAYAW AEFHKWGFNG GNVTRNADNY CAAQTYIDLY
NLEPDAKKLK NTKANINMLL NTPQLNDWSW IDAIQMGMPV FAKMGVLEKN NRYFEKMYDM
YMFSRNKHGD NGLYNPKEGL WWRDADFDPP YKEPNGKNCY WSRGNGWVIA ALAKVLTIIP
ENAPHREQYV KDLKAMAGAL VSIQRVDGFW NVSLHDPSNF GEKETSGTAL FIYGMAYGIN
SGILKKETYL PVIQKAWNAI TTESLHTNGF LGYLQSTGKE PKDGQPLSYD KIPDFEDYGL
GCFLLAGSEI YKLK
|
|---|
| |