| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4228 |
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| Symbol | |
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| ID | 5092270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 5090602 |
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| End bp | 5091930 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644743647 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196555 |
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| Protein GI | 146301964 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TCTTAAAAAT CATATTCTGT GTTATTGCCT TTGCTCAAAC GGCAATTTCG
CAGAATTACA CTAATGACAC ATTTCCTGAC GGAAGCCCAA TCTCCAATTG GTTTAAAGAC
TATTCTAAAA TTCAGCTGAA AGATTTAGGA AAAAAATACA CCATAACAGA TTTTGGAGTA
AGTAAAGACA GTACTAAAAT CCAGACCACT GCCATACAAA AAGTAATCGA TAAAGCTTCT
GCAAATGGAG GAGGAGTAAT CGTAATTCCT AAAGGTGTTT TTTTAAGCGG TGCCTTATTT
TTTAAACCCA AAACAGCTTT GTATGTATCA GAAGGAGGCG TTTTAAAAGG ATCAGATAAT
ATTGCCGATT TCCCTATTAT GCCATCAAGA ATGGAAGGGC AGAACCTGGA TTATTTTCCT
GCGCTTGTAA ATGCCTATAA CGTTGATAAT TTCTCAATTT CAGGAAAAGG AACAATAAAC
GGAAACGGAA AAAAATATTG GGAAGCCTTT TGGGAACGAC GCAAAGAAAA CCCAAAATGC
ACCAATCTAG AAGTTTCAAG ACCAAGATTA GTTTTTGTGT GGAATTCCAA CAACGTACAG
TTTCAGGATG TAAAACTGAT CAATTCCGGT TTCTGGACCA ATCACTTTTA CAAATGCAAT
AATGTGAAAC TGCTTGATTT GTATATTTTT TCGCCGCACA TCGAAATTAA AGCACCAAGT
ACAGATGCTA TAGATATTGA TATTTGCAAT AACTTTTTGG TAAAAGGCTG TTATATGTCC
GTTAACGACG ATGCTATTGC CTTAAAAGGA GGAAAAGGCC CTTATGCCGA TCAGGATAAA
AACAACGGTC CTAACTCGAA TATTATTATA GAAGACTGCA ATTTCGGATT CTGTCATTCA
GCCTTAACAA ACGGAAGTGA ATCGATTCAT AACCGAAATG TAATTATGAG AAACTGCAAG
ATAGACGGAG CTTCGAGAAT GTTATGGCTT AAAATGCGTC CTGATACACC GCAGCGATAC
GAATACATAC GAGTAGAAGA TATAAAAGGG CAGGCCAAAA CAGGTTTGGC GATTTTTGCA
TGGAAACAGT TTTTTGATTT AAAAGGCCGT CCTGATATTC CGTTATCTTA CGGAGATAAT
GTAACGTTGA AAAATATCAA CTTAAAATGT GAAACATTTT ACGGAGTAGA GAACGATCCA
AATGTTCGTT TAACCAATTT TACATTTGAA AATTTAAATA TCGAAACTGT AAAAACGAAT
ATTGATAAAA GCGTAATAAA AGGAGTTGAA TTTAAGAATG TCTATGTAAA TAAGCAGTTA
ATCGAGTAA
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| Protein sequence | MKTILKIIFC VIAFAQTAIS QNYTNDTFPD GSPISNWFKD YSKIQLKDLG KKYTITDFGV
SKDSTKIQTT AIQKVIDKAS ANGGGVIVIP KGVFLSGALF FKPKTALYVS EGGVLKGSDN
IADFPIMPSR MEGQNLDYFP ALVNAYNVDN FSISGKGTIN GNGKKYWEAF WERRKENPKC
TNLEVSRPRL VFVWNSNNVQ FQDVKLINSG FWTNHFYKCN NVKLLDLYIF SPHIEIKAPS
TDAIDIDICN NFLVKGCYMS VNDDAIALKG GKGPYADQDK NNGPNSNIII EDCNFGFCHS
ALTNGSESIH NRNVIMRNCK IDGASRMLWL KMRPDTPQRY EYIRVEDIKG QAKTGLAIFA
WKQFFDLKGR PDIPLSYGDN VTLKNINLKC ETFYGVENDP NVRLTNFTFE NLNIETVKTN
IDKSVIKGVE FKNVYVNKQL IE
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