Gene Fjoh_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4214 
Symbol 
ID5093844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5064423 
End bp5065697 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content38% 
IMG OID644743633 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001196541 
Protein GI146301950 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4952] Predicted sugar isomerase 
TIGRFAM ID[TIGR02629] L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0943011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATCG GATCAAACCA TATTGAATCT CATAACGAGG GATTATTAAA AAAACACCAA 
AATAAATTGG TTTTTACAGC ATCAGAAATT GATAATACAG AGGCGATTAT CCAAAAATTA
ATCGACTTTC AAATTGCTAT TCCATCTTGG GCTTTAGGAA CAGGAGGAAC AAGATTTGGA
CGTTTTGCAG GCGGAGGAGA ACCTCGTTCA ATCGAAGAAA AAATCGAAGA TGTTGGATTA
CTTCACAAAT TAAACAGCGC TTCGGGAGCA ATTTCGCTTC ATATTCCGTG GGATATTCCG
CAAGATTACA AAGCTATTAA AGCACTTGCA GCACAGCACA ATTTAAAATT TGACGCCATG
AACTCGAATA CATTTCAGGA TCAGGCAGAC TCAGAACATA CTTATAAGTA CGGTTCATTA
CAAAACGTAA ACAAAGCAGT CCGCAAACAG GCGATTGCAC ACAATATAGA AGTTATTAAA
CACGGAATCG AATTAGGATC TGAGTCATTA ACAATCTGGC TTGCCGATGG TTCTAACTTT
CCGGGGCAAT TAAACTTTAG AAAAGCATAT CAAAATACAT TAGAAAGTTT AGAAGAAATC
TACGATGCCC TGCCTTCAAA CTGGAAATTA TTTTTAGAAT ACAAATGTGC TGAGCCTAAC
TTTTATTCAA CGACCGTAGC AGATTGGGGG CAGTCTTACT CGTATGTTAA AAAGTTAGGC
GATAAAGCGC AGACATTAGT CGATTTAGGA CACCACCTGC CAAATGCCAA TATCGAGCAG
ATTGTTTCCT TATTATTAAT GGAAAACAAA CTGGGCGGAT TCCACTTTAA CGATTCAAAA
TACGGCGATG ACGATTTAAC TGCCGGAGCT TTAAAACCTT ATCAGTTATT TTTGATTTTC
AATGAATTGG TTGAAGGAAT GGACGCAAGA GGAATGAACC ACGCCAAAGA TTTAGGCTGG
ATGATCGACG CATCACACAA CATCAAAGAT CCGTTAGAAG ATTTGCTGCA GTCTGTAGAA
GCTATTATGA TTGCTTATGC ACAAGCACTT TCTGTAGACA GAAAAGCATT AGAAAAAGCA
CAAGAAGAAA ATGATGTGGT AAAAGCACAG GAAATTCTTC AAAATGCTTT CCGTACAGAC
GTTCGCGCAT TAGTTGCTGA GGCACGTTTA CGTTCTGGTG CAGCTTTAAA TCCGGTAGAA
TTGTACAGAA ACCTTTCTGT AAGAAAAAAT CTAATTGGAG AAAGAGGATT AAAAACATTG
GCAACAGGAC TATAA
 
Protein sequence
MIIGSNHIES HNEGLLKKHQ NKLVFTASEI DNTEAIIQKL IDFQIAIPSW ALGTGGTRFG 
RFAGGGEPRS IEEKIEDVGL LHKLNSASGA ISLHIPWDIP QDYKAIKALA AQHNLKFDAM
NSNTFQDQAD SEHTYKYGSL QNVNKAVRKQ AIAHNIEVIK HGIELGSESL TIWLADGSNF
PGQLNFRKAY QNTLESLEEI YDALPSNWKL FLEYKCAEPN FYSTTVADWG QSYSYVKKLG
DKAQTLVDLG HHLPNANIEQ IVSLLLMENK LGGFHFNDSK YGDDDLTAGA LKPYQLFLIF
NELVEGMDAR GMNHAKDLGW MIDASHNIKD PLEDLLQSVE AIMIAYAQAL SVDRKALEKA
QEENDVVKAQ EILQNAFRTD VRALVAEARL RSGAALNPVE LYRNLSVRKN LIGERGLKTL
ATGL