Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4214 |
Symbol | |
ID | 5093844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5064423 |
End bp | 5065697 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644743633 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001196541 |
Protein GI | 146301950 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4952] Predicted sugar isomerase |
TIGRFAM ID | [TIGR02629] L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0943011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATCG GATCAAACCA TATTGAATCT CATAACGAGG GATTATTAAA AAAACACCAA AATAAATTGG TTTTTACAGC ATCAGAAATT GATAATACAG AGGCGATTAT CCAAAAATTA ATCGACTTTC AAATTGCTAT TCCATCTTGG GCTTTAGGAA CAGGAGGAAC AAGATTTGGA CGTTTTGCAG GCGGAGGAGA ACCTCGTTCA ATCGAAGAAA AAATCGAAGA TGTTGGATTA CTTCACAAAT TAAACAGCGC TTCGGGAGCA ATTTCGCTTC ATATTCCGTG GGATATTCCG CAAGATTACA AAGCTATTAA AGCACTTGCA GCACAGCACA ATTTAAAATT TGACGCCATG AACTCGAATA CATTTCAGGA TCAGGCAGAC TCAGAACATA CTTATAAGTA CGGTTCATTA CAAAACGTAA ACAAAGCAGT CCGCAAACAG GCGATTGCAC ACAATATAGA AGTTATTAAA CACGGAATCG AATTAGGATC TGAGTCATTA ACAATCTGGC TTGCCGATGG TTCTAACTTT CCGGGGCAAT TAAACTTTAG AAAAGCATAT CAAAATACAT TAGAAAGTTT AGAAGAAATC TACGATGCCC TGCCTTCAAA CTGGAAATTA TTTTTAGAAT ACAAATGTGC TGAGCCTAAC TTTTATTCAA CGACCGTAGC AGATTGGGGG CAGTCTTACT CGTATGTTAA AAAGTTAGGC GATAAAGCGC AGACATTAGT CGATTTAGGA CACCACCTGC CAAATGCCAA TATCGAGCAG ATTGTTTCCT TATTATTAAT GGAAAACAAA CTGGGCGGAT TCCACTTTAA CGATTCAAAA TACGGCGATG ACGATTTAAC TGCCGGAGCT TTAAAACCTT ATCAGTTATT TTTGATTTTC AATGAATTGG TTGAAGGAAT GGACGCAAGA GGAATGAACC ACGCCAAAGA TTTAGGCTGG ATGATCGACG CATCACACAA CATCAAAGAT CCGTTAGAAG ATTTGCTGCA GTCTGTAGAA GCTATTATGA TTGCTTATGC ACAAGCACTT TCTGTAGACA GAAAAGCATT AGAAAAAGCA CAAGAAGAAA ATGATGTGGT AAAAGCACAG GAAATTCTTC AAAATGCTTT CCGTACAGAC GTTCGCGCAT TAGTTGCTGA GGCACGTTTA CGTTCTGGTG CAGCTTTAAA TCCGGTAGAA TTGTACAGAA ACCTTTCTGT AAGAAAAAAT CTAATTGGAG AAAGAGGATT AAAAACATTG GCAACAGGAC TATAA
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Protein sequence | MIIGSNHIES HNEGLLKKHQ NKLVFTASEI DNTEAIIQKL IDFQIAIPSW ALGTGGTRFG RFAGGGEPRS IEEKIEDVGL LHKLNSASGA ISLHIPWDIP QDYKAIKALA AQHNLKFDAM NSNTFQDQAD SEHTYKYGSL QNVNKAVRKQ AIAHNIEVIK HGIELGSESL TIWLADGSNF PGQLNFRKAY QNTLESLEEI YDALPSNWKL FLEYKCAEPN FYSTTVADWG QSYSYVKKLG DKAQTLVDLG HHLPNANIEQ IVSLLLMENK LGGFHFNDSK YGDDDLTAGA LKPYQLFLIF NELVEGMDAR GMNHAKDLGW MIDASHNIKD PLEDLLQSVE AIMIAYAQAL SVDRKALEKA QEENDVVKAQ EILQNAFRTD VRALVAEARL RSGAALNPVE LYRNLSVRKN LIGERGLKTL ATGL
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