| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4190 |
|---|
| Symbol | |
|---|
| ID | 5093820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5030678 |
|---|
| End bp | 5031490 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644743609 |
|---|
| Product | D-mannonate oxidoreductase |
|---|
| Protein accession | YP_001196517 |
|---|
| Protein GI | 146301926 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.203322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAA TATTCAATTT AAAAGGAAAA ATTGCTCTGA TTACGGGAGG TGCCGGAGTT
TTAGGAAGCA ATTTTGCAAA TGTATTAGCA AAACAAGGTG TTATTGTGGG AATCGTTTCG
CAGTCACTTG AAAAAGCCGA AAGCACTGTA AAAACTCTTG AAGCAAACGG CGGACAAGGT
TTTGCGGTTC AGGCCAATGT TTTAAATAAA GAAGAAGTAG AAAAAGTAAG AGATTTTATT
GTTGAAAAAT ACGGACGTCT TGATATTTTG ATTAACGCAG CCGGCGGAAA TATGCCCGGA
GCGACTATCC AGCCAGATCA GGCAGTTTAT GATATGAAAA GCGATGATTT ACAAAAAGTA
ATCGATTTGA ATATCATTGG AACCATGCTT CCTACTCAGG TTTTTGCAGA GTTATTTGCT
AAACAAAAAC AAGGAAATAT CATTAATATT TCATCTGCTT CGGCACAAAG ACCTTTAACG
AGAGTTGTAG GTTATTCGGC TTCAAAAGCG GCGATTGATA ATTTCACGCA ATGGATGGCA
GTTGAATTAG CCCAAAAATA TGGTGAAGGA ATTCGTGTAA ACGCTATTTC ACCAGGTTTT
TTCATTGGAG AACAAAATCG TGCTTTATTA TTAACTCCGG AAGGAAAATT AACTCCAAGA
GGTGAAAAAA TCATCGATCA CACGCCAATG GGAAGATTTG GAACTCCAGA AGATATTGAT
GGTGCACTTT TGTTTTTATG CAGCGATATG TCAAAATTCG TAACAGGAAC TATCTTAAAA
GTTGACGGCG GTTTTGCTGC AACAAGTATC TAA
|
|---|
| Protein sequence | MDSIFNLKGK IALITGGAGV LGSNFANVLA KQGVIVGIVS QSLEKAESTV KTLEANGGQG
FAVQANVLNK EEVEKVRDFI VEKYGRLDIL INAAGGNMPG ATIQPDQAVY DMKSDDLQKV
IDLNIIGTML PTQVFAELFA KQKQGNIINI SSASAQRPLT RVVGYSASKA AIDNFTQWMA
VELAQKYGEG IRVNAISPGF FIGEQNRALL LTPEGKLTPR GEKIIDHTPM GRFGTPEDID
GALLFLCSDM SKFVTGTILK VDGGFAATSI
|
|---|
| |