| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4171 |
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| Symbol | |
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| ID | 5093801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 5001705 |
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| End bp | 5002247 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644743590 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001196498 |
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| Protein GI | 146301907 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.619181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACCCA AATTACCAAT GAAGAATCCT GAAATTTTTG AACAAACGTA TACAGACTAC
TGGCAGAAAC TCAATGCCTT TTCTTATACG ATGACTCAGG ATAAAGATTT GGCACAGAAC
ATTGTTCAGG ATGTATTTAT TGATTTATGG GAACGAAAAG ACGATTTAAA CATCAATGCA
ATCGAACCAT ATTTATTCAG GGCTGTAAAA AATCAGATTT TTAAACATTA CCAGAATAAT
CGTTTTGATA AGACGATTAT GGAAGACAAA TTTGAAGATT ACATTATCGA CAATTTTTCG
ACTATTGATC CAGAGGTAAC AGATTTGCTT TATTCCTTAT TAGACAAACT TCCCGAAAAA
AGAAAAGAGG TTTTATTAAT GTACAAATTC CAGGATATGT CAATTGACCA GATTGCAGAT
GAACTTGGAA TTTCAAAACA AACGGTGAAA AACCAAATTT CATCGGCACT AAAACAATTG
CGTGAAGGCT TGAAAGATCT GGTCTGGCTG GCTCCAATTG TATTTTTTAA ACAAAATTTT
TAA
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| Protein sequence | MLPKLPMKNP EIFEQTYTDY WQKLNAFSYT MTQDKDLAQN IVQDVFIDLW ERKDDLNINA
IEPYLFRAVK NQIFKHYQNN RFDKTIMEDK FEDYIIDNFS TIDPEVTDLL YSLLDKLPEK
RKEVLLMYKF QDMSIDQIAD ELGISKQTVK NQISSALKQL REGLKDLVWL APIVFFKQNF
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