Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4170 |
Symbol | |
ID | 5093800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5000624 |
End bp | 5001547 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644743589 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001196497 |
Protein GI | 146301906 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.193975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA GAATCAAACA TAGTTTAGAA TATTTAATTG ATAAAAGTTC AAGAAATAAA ACTTCACAAG CAGAAGAAAA CCTGCTTACC AATTTTGCTT TAAGCGAATA CCAAAATGTA AAATGGAATG AAGCTTTAAT GGGAAATTCT GATGAAGTTT CTAAAAATAT ATACGATGGA ATTCAGCTTC GAATTACAAA GAAGAAAACC ATCAGTCCTT ATATAAAATA TATGGCAGCT GCCAGTATTC TTTTTCTAGC AGGTTTAGGA TTTTTCTACA AACCCACAAT TGCAGCCGAA AAGCAATTAG CATTTAAAAC GTCAGATACC CCCAAATCTA TCAAATTAAG TGACGGCTCG AAAATTTATC TGGCAGCAAA CTCATCATTC CTGTATCCTG AAAATTTTAA AGGAGACGAA AGAAAAGTTA CTCTTTTAAA AGGAAATGCC TTTTTTGAAG TAACTAAAGA CAAAAAACAC CCTTTTATCA TTACTTCCGG TGAAATAAAA ACGAGAGTTG TAGGAACTTC ATTTCACATT CAAATGTCAA AATCAAAATG CGAAGTAATT GTCGTTACCG GAAAAGTAAA TGTTAGTTCA AAAGGTCACA GCGTTGATTT AGTGCCAAAT GAAGAAGCTT TATTCGAAGC TCAAAAACTA ACCAAACAAC TGGCAGATAA ATCATTTTTG GTCAATTGGT ACAATACCGA TGTAACACTG AACCAGACTA CGCTAAAACA AGTTATTACC ATTTTACAAT ATAAATACGG AGTTTCATTT CAATATAGTA ATGAGCAGGT ATTAGCAACG CCGTTAACGG TATTCATTAA AAAAGACGCA GCATTAGAGA ATGTTTTAGA ACAAATAAAT TATATCACCA ACCTAAAATT CAAAGTTTAT GGCGAAACAG TAAAAGTGGA TTAA
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Protein sequence | MIKRIKHSLE YLIDKSSRNK TSQAEENLLT NFALSEYQNV KWNEALMGNS DEVSKNIYDG IQLRITKKKT ISPYIKYMAA ASILFLAGLG FFYKPTIAAE KQLAFKTSDT PKSIKLSDGS KIYLAANSSF LYPENFKGDE RKVTLLKGNA FFEVTKDKKH PFIITSGEIK TRVVGTSFHI QMSKSKCEVI VVTGKVNVSS KGHSVDLVPN EEALFEAQKL TKQLADKSFL VNWYNTDVTL NQTTLKQVIT ILQYKYGVSF QYSNEQVLAT PLTVFIKKDA ALENVLEQIN YITNLKFKVY GETVKVD
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