| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4168 |
|---|
| Symbol | |
|---|
| ID | 5093798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4995496 |
|---|
| End bp | 4997262 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644743587 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001196495 |
|---|
| Protein GI | 146301904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.13249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA AGACATTTTT AAGCATAAAA GTTTTAACAT TATTCTCTTT TATTTTTCTT
CTAAACAGCT GTACTGATCT GGATGAAGTC TTTTTAGATG AAATTCCTGG AAATACAGTT
TCAGATCCTG CAGGTTCACT TGCTGCCGCT TATGACAGAT TAGGTGACGG AACTTTCGTT
GATCACGGAG CCATTTTTGC CATGCAGGAA TATACTACAG ATGAAGCTAT TTTACCAACT
CGCGGAAGTG ACTGGGGAGA CGGAGGAAAA TGGAGAGACA TGCACGAATT TACATGGAGT
TCTAGTAATG CAATTATTGT AGGGAACTGG GATTTATTAA CAAATGGTAT TACACGTTGT
ATAACAGCTA TAGAATCGGC TGAAAAAAGT TCAATTACTG AAAAGAAATT ATTTTCTGCA
GAAGCAAAAG CACTTTTGGC TTTTTACACA TATACCACTT TGGATTTATA CGGACAAGCT
CCATACAAAG ATCCAATGGA TCCTAAAGCT GATTTGCAAA TTTTAAAAGC AGATACTCAA
ATCGATAAAT TAATTACCGA TGTTGAGGCT TTAATTCCAG ATTTAGCTGA TATTGGAACG
CAGAGAACTT ACCACGGAAG ATTTACAAAA CAGGCAGCTT ATGGTTTCTT AGCTACAATG
TACTTAAACC GTGCGGTGTT TAAAGACCGT TACAATGCAT CATCAAATTT TAATTTTAAT
GAACCGGCAT TATCAGGCGG AGGAACAGAT ATGGATCGTG TTATTTACTA CACATCATTG
TTGATCGATT CAGGAAAATT TAGTTTAGAA AGTGACTATT TTAAAAACTT TGCCAGAGAT
AATGACAATG GTAAAGAACT TATTTTTGCG ATTTCTCAAA AGATAGATTA CATCCGTAAT
GGTTCTAACA GCTTTGCTTA TGTATGTATG GAACGTAACC AAAGAACATC TGCAGCAAAC
AGAGGAACAA ATGCAGCTTG TACAACTCCT GAGTTTTATG CAACATGGGA TGGCAATCAT
GACGATCCAA GATTTGAACA GCATTATCAA TATGCTGATG GTACATGGTT TATGAATGAT
GGTACAGATG TAAGTGTTCC GGCAACAGAC ATTGTTCCAA AAAGTGCTAA TTTACCTTGG
TTCCACTTCA ACAGAGGAAT CCAGGCTGGA CTTCAATACG GACCGATATT ATTAGCTTCT
GGTTCTCTTG AAATGGTAGG AAACCGTATT AAAGTTTCTC CATTGTATAT GGAAAAAAGC
ACAGGTACAA GAATGAATTT TACACCATCA TTAACGTTCT CAGATCCAAC TAAATCTGTT
TTTGCTCAAA ATGAAATTAA TCAGGGAGCT CGTGTTTTTA AATATGAATT TGACCCTGAA
GGAGGAAACG GAAACAGTAA TGTTGATATT CCATTATTCC GTTTAGGAGG AATTTACGCA
ATGAGAGCCG AAGCTTATTT CAGAAAAGGA AATACAGGTT CTGCAATGGA TGATTTAAAC
AAACTGCGTA CAAGCAGAAA AAGAGAATCT TTATTTGGTA ACGCTGCAGG AAAAGCCCTT
ACATCTTTAG ATTCACAGCA ATTATACAAA GAATTAGGTT TCGAATTATA CTGGGAATTG
CAAAGAAGAC CACAGAGCAT TCGTTTTGGA AAATACGATT TAGCAGGAAC TGCAAAAGCT
GCTTCACAGC CATTTAGAAG AATATTTCCA ATCCCCCAAA CTGTTATCGA CCAAAAAGTG
TTTCAACAGA ACCAAGGGTA CAATTAA
|
|---|
| Protein sequence | MKTKTFLSIK VLTLFSFIFL LNSCTDLDEV FLDEIPGNTV SDPAGSLAAA YDRLGDGTFV
DHGAIFAMQE YTTDEAILPT RGSDWGDGGK WRDMHEFTWS SSNAIIVGNW DLLTNGITRC
ITAIESAEKS SITEKKLFSA EAKALLAFYT YTTLDLYGQA PYKDPMDPKA DLQILKADTQ
IDKLITDVEA LIPDLADIGT QRTYHGRFTK QAAYGFLATM YLNRAVFKDR YNASSNFNFN
EPALSGGGTD MDRVIYYTSL LIDSGKFSLE SDYFKNFARD NDNGKELIFA ISQKIDYIRN
GSNSFAYVCM ERNQRTSAAN RGTNAACTTP EFYATWDGNH DDPRFEQHYQ YADGTWFMND
GTDVSVPATD IVPKSANLPW FHFNRGIQAG LQYGPILLAS GSLEMVGNRI KVSPLYMEKS
TGTRMNFTPS LTFSDPTKSV FAQNEINQGA RVFKYEFDPE GGNGNSNVDI PLFRLGGIYA
MRAEAYFRKG NTGSAMDDLN KLRTSRKRES LFGNAAGKAL TSLDSQQLYK ELGFELYWEL
QRRPQSIRFG KYDLAGTAKA ASQPFRRIFP IPQTVIDQKV FQQNQGYN
|
|---|
| |