Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4134 |
Symbol | |
ID | 5094043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4970215 |
End bp | 4970946 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644743553 |
Product | LytTR family two component transcriptional regulator |
Protein accession | YP_001196461 |
Protein GI | 146301870 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.291369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAT TAAAATGTAT AGCAGTAGAT GATGAACCTC TGGCATTAAA ACTGGTCGAA ACTTTTATTG ACCAGACTCC TTTTTTGCAA TTGAGCGCCA GCTGCGATAA TGCGGTTGAA GCCATGAGTT TAATCAGAGA AAAACAGCCG GATTTGGTTT TTCTGGACAT CAATATGCCC AATTTAACGG GAATGGAACT CGCAAGACTT TTGCAGGAAC AGCCGGGACA AGTGCCAAAA ATCGTTTTTA CTACCGCTTA CAATCATTAT GCAATTGAAG GTTATAAGGT AAATGCAGTC GATTATCTTT TAAAACCCTT CAGTTACGAA GAGTTTTTAC GTGCTGCAAA TAAAGTGCTT CAAATAACCG AAGAAGCATC AAACAACTTC CAGCCCATTA CAGCCGATGA TGAATTTATT TTCTTAAAAG TAGAATATCA ATGGGTTAGA ATCTCTCTAA AAGAAATTTT ATATATCGAA AGTTTAAAAG ATTATGTAAA AGTTCATCTG GATGACAATC AAAAAGCAAT ACTTTCTTTG ATTTCCTTAA AAGCTTTAGA AGAAAAATTA CCGTCAGCGA AATTTATGCG TGTTCATCGA TCATTCATTG TTTCACTTGA TAAAATAAAC GCCATCAGCA AGAATTCTAT TTTTATAGAT AAAACAGAAA TTACAGTAGG AGAACAATAC AAAGAAACGT TTAAAACCAT TGTAGATAAA TGGTTAAAGT AA
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Protein sequence | MTTLKCIAVD DEPLALKLVE TFIDQTPFLQ LSASCDNAVE AMSLIREKQP DLVFLDINMP NLTGMELARL LQEQPGQVPK IVFTTAYNHY AIEGYKVNAV DYLLKPFSYE EFLRAANKVL QITEEASNNF QPITADDEFI FLKVEYQWVR ISLKEILYIE SLKDYVKVHL DDNQKAILSL ISLKALEEKL PSAKFMRVHR SFIVSLDKIN AISKNSIFID KTEITVGEQY KETFKTIVDK WLK
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