Gene Fjoh_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4134 
Symbol 
ID5094043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4970215 
End bp4970946 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content34% 
IMG OID644743553 
ProductLytTR family two component transcriptional regulator 
Protein accessionYP_001196461 
Protein GI146301870 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.291369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAT TAAAATGTAT AGCAGTAGAT GATGAACCTC TGGCATTAAA ACTGGTCGAA 
ACTTTTATTG ACCAGACTCC TTTTTTGCAA TTGAGCGCCA GCTGCGATAA TGCGGTTGAA
GCCATGAGTT TAATCAGAGA AAAACAGCCG GATTTGGTTT TTCTGGACAT CAATATGCCC
AATTTAACGG GAATGGAACT CGCAAGACTT TTGCAGGAAC AGCCGGGACA AGTGCCAAAA
ATCGTTTTTA CTACCGCTTA CAATCATTAT GCAATTGAAG GTTATAAGGT AAATGCAGTC
GATTATCTTT TAAAACCCTT CAGTTACGAA GAGTTTTTAC GTGCTGCAAA TAAAGTGCTT
CAAATAACCG AAGAAGCATC AAACAACTTC CAGCCCATTA CAGCCGATGA TGAATTTATT
TTCTTAAAAG TAGAATATCA ATGGGTTAGA ATCTCTCTAA AAGAAATTTT ATATATCGAA
AGTTTAAAAG ATTATGTAAA AGTTCATCTG GATGACAATC AAAAAGCAAT ACTTTCTTTG
ATTTCCTTAA AAGCTTTAGA AGAAAAATTA CCGTCAGCGA AATTTATGCG TGTTCATCGA
TCATTCATTG TTTCACTTGA TAAAATAAAC GCCATCAGCA AGAATTCTAT TTTTATAGAT
AAAACAGAAA TTACAGTAGG AGAACAATAC AAAGAAACGT TTAAAACCAT TGTAGATAAA
TGGTTAAAGT AA
 
Protein sequence
MTTLKCIAVD DEPLALKLVE TFIDQTPFLQ LSASCDNAVE AMSLIREKQP DLVFLDINMP 
NLTGMELARL LQEQPGQVPK IVFTTAYNHY AIEGYKVNAV DYLLKPFSYE EFLRAANKVL
QITEEASNNF QPITADDEFI FLKVEYQWVR ISLKEILYIE SLKDYVKVHL DDNQKAILSL
ISLKALEEKL PSAKFMRVHR SFIVSLDKIN AISKNSIFID KTEITVGEQY KETFKTIVDK
WLK