Gene Fjoh_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4133 
Symbol 
ID5094042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4969172 
End bp4970215 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content34% 
IMG OID644743552 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_001196460 
Protein GI146301869 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.500878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA ACGTTTACAG ACCTTATTTT TTTACCGGAC TGCATATTCT AAGCTGGTTA 
TTACTGGGAT TTATCATGTT GTTTTACATG CCTTTAACCT GGAATGTAAT TCTTCCTGGT
ATTTTCTGGC TTTGGCAGAT TATTATATTG ATTTTGTTAA TCATTATTTT TTACACTAAT
GCTAAAATCA TAGTTCCCAA AACCATTATA AAAGACAATA CTTCTCCGTT TTTAATCTGG
GCATTTATCA TTGTTTTTGT AATGCAGCTT ATCGCTTATT TTTATACCTC GCAGACTGAT
CTTCATAATA AAATAAGCTT GGTTTTAGGA TTCAAAAAAT ATAGAAATCC CTATTTCGAC
AATTATGTTT TAATGCTCAC TTTATTGGTT TTAGGAATCA GCACGAGCTG GGCAATGTTA
CAATACTGGC AGAAAGCCGC ACAGCACAAA CAAAAACTGG AGCAGGACAA AACAGTTGCC
GAACTGGCTA TGCTGAAAGC ACAAATTAAT CCGCACTTTT TCTTTAATTC CTTAAATAGT
ATTTATTCCC TTACTTATAC AGATATTGAA GATTCCAGAA ATGCGCTTCA TACTTTAAGC
CGAATGATGC GTTATTTATT GTACAGTACC GAAGAAAGAA CAACATTATT AAAAGAAGCC
GAGTTTATGA GAGATTTTAT CGCCCTTATG AAACTTCGTG CCAATAAAAA GCTGACGATT
ACAACCGACA TTCCAGAAAA AATACACGAT TACCCAATTG TTCCAATGTT ATTATTACCT
TTAGTAGAAA ATGCTTTTAA ACACGGCATT CATGCTACCG ATAAAAGTGA AATTCATATT
AAACTGAGAC AAAACGGAAG CAATCTGGAA TTTGAAGTAG AAAATACCTA TTTCGAAAAA
ACGTCTACTA CAGATGAAGG CGGCATTGGG TTAACAAATA CAAAACGCAG ACTGCATTTA
ATTTATCCGC ATAAACATAC TCTGATAGCA GGTATCGCTA AAAACGGTAT GTATAATGTA
CAGCTGCAAA TAAATTTAGA ATAA
 
Protein sequence
MASNVYRPYF FTGLHILSWL LLGFIMLFYM PLTWNVILPG IFWLWQIIIL ILLIIIFYTN 
AKIIVPKTII KDNTSPFLIW AFIIVFVMQL IAYFYTSQTD LHNKISLVLG FKKYRNPYFD
NYVLMLTLLV LGISTSWAML QYWQKAAQHK QKLEQDKTVA ELAMLKAQIN PHFFFNSLNS
IYSLTYTDIE DSRNALHTLS RMMRYLLYST EERTTLLKEA EFMRDFIALM KLRANKKLTI
TTDIPEKIHD YPIVPMLLLP LVENAFKHGI HATDKSEIHI KLRQNGSNLE FEVENTYFEK
TSTTDEGGIG LTNTKRRLHL IYPHKHTLIA GIAKNGMYNV QLQINLE