| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4117 |
|---|
| Symbol | |
|---|
| ID | 5094027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4949086 |
|---|
| End bp | 4949922 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644743536 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001196444 |
|---|
| Protein GI | 146301853 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACC GAATTGATTC TCATCAGCAT TTTTGGAAAT TTGATCCCGT TAGAGACAGC
TGGATTGATG AAAGTATGTC GAAAATTCAA AGAGATTTCC TTCCGGAAGA TTTATTGCCT
CTGCTTAAAG AAAACAAGTT TTCGGGTTGT GTAGCAGTTC AGGCAAGTCA GTCTGAACAT
GAAACCCATT TTCTTGCAGA TCTGGCTTCA AAAAATGATT TTATAAAAGG AATCGTAGGC
TGGGTTGATC TTCGTGCAGA TAATATTTCA GATCGGTTGC GTCATTTTTC TTCGAATAAA
ACCATTAAAG GATTCCGACA TGTTGTACAA GGTGAAGCCG ATGATTTTAT GTTTAGAGAA
GATTTCCGCA ACGGAATTTC GGCTTTAAAA GAGTTTGATT TTACGTATGA TATTTTGATT
TTTCATCGTC AGTTACCAGC AGCGATAAGT TTGGTAAAAG ATTTTCCAAA CCAAAAGTTT
GTAATAGATC ATATTGCAAA ACCAGATATT AAATCAGGCA TTATAGATTC ATGGAAAAGC
GGTATAGAAG AAATTGCAAA ATACAATAAT GTATGGTGTA AAGTTTCTGG AATGGTCACA
GAAGCCGACT GGAAAAACTG GAAACCAGAA GATTTAAAAC CGTACTTGGA TGTAATTTTT
GAAAATTTCC CAACAGATAA AATACTATAC GGTTCAGATT GGCCGGTTCT AAATGTAGCT
TCTGATTATA ATGAGGTTGT GAAAACTTTA GAAGATTATA TTTCGAAATT TTCTATCGAA
GACCAGAATA AAATTTGGTT TGAAAATGCA GTTTCGTTTT ATAATTTGAA TCAATAA
|
|---|
| Protein sequence | MNNRIDSHQH FWKFDPVRDS WIDESMSKIQ RDFLPEDLLP LLKENKFSGC VAVQASQSEH
ETHFLADLAS KNDFIKGIVG WVDLRADNIS DRLRHFSSNK TIKGFRHVVQ GEADDFMFRE
DFRNGISALK EFDFTYDILI FHRQLPAAIS LVKDFPNQKF VIDHIAKPDI KSGIIDSWKS
GIEEIAKYNN VWCKVSGMVT EADWKNWKPE DLKPYLDVIF ENFPTDKILY GSDWPVLNVA
SDYNEVVKTL EDYISKFSIE DQNKIWFENA VSFYNLNQ
|
|---|
| |