| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4115 |
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| Symbol | |
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| ID | 5094025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 4945891 |
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| End bp | 4947573 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644743534 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196442 |
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| Protein GI | 146301851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA ACCTAACTAA CCTTTTCTGC ACAGCACTGA CCATTCTGGC AGTAAGCTTT
TCTGTACCGG TTTTGGCACA AAAAGCGTCT GATACTTACA AAGACATTGA ATTTAAAATG
GCCAAAATCA AAGAGCCGGT TATTCCTAAA AACAGTGTAA ACATAAAAGA TTTTGGTGCG
GTTAACGGTG GTTATGTCTT AAACACGAAG GCTTTTGCTG ATGCTATTGA TGCTGTTTCT
AAAAAGGGCG GCGGAAAAGT TATTATTCCT CCGGGAATCT GGCTTACAGG TCCAATTATT
CTAAAAAGCA ATATCGAATT ACACGCTGAA AGAGGCGCTT TAATAAAATT TTCTACAGAC
AAATCATTAT ATCCTATTAT CGGAACTAAT TTTGAAGGAC TAAATACCTG GCGATGCATC
TCTCCTATTT ATGGTAAAAA TCTTGAGAAC ATTGCTTTTA CCGGAAATGG TGTTTGGGAT
GGTTCTGGAG AAGTTTGGAG ACAGGTTAAA AAAAGTAAGT TGACAGAAAG CCAGTGGAAA
AAATTTGTCA GTTCAGGCGG GGTTTTAAAT AAAGACAAAA CAAGCTGGTA TCCATCTGAA
ACTTTTATGA ACGCTTCTAA AGGTGCTGAT CAAAACGTAC GTCCGGATTT AAAAACGAAA
GAAGAATTTG AAACTATTCA CGATTTTCTG CGTCCGGTAA TGGTAAGTAT TCAAAACAGC
AAAAGAGTTT TATTTGACGG TCCAGTTTTT CAAAATTCAC CAGCTTGGAA TATTCACCCT
TTTATGGTAG AAGATTTAAT TGTGAGAAAT GTAACGGTTC GTAATCCGTG GTATTCTCAA
AATGGTGACG GTCTTGATGT AGAATGCTGT AAAAATGTTT TGGTTGAAAA TTCAAGTTTT
GATGTGGGTG ACGATGCCAT CTGTATTAAA TCCGGAAAAG ATAAGGATGG ACTTGAAAGA
GGTATTCCGT GCGAAAATAT TATTGTGAGA AACAATATCG TATATCACGG ACACGGCGGC
GTAACGGTTG GAAGTGAAAT GTCAGGAGGT GTAAAAAACC TGCATGTTTC AAATTGTACT
TTTATGGGAA CTGATGTTGG TCTGCGTTTT AAAAGTGCAC GCGGCAGAGG CGGTGTTGTA
GAAAATATCT TTATTTCAGA TGTTTTTATG ACTGATATTC CATCGCAGGC TATTTCTTTT
AACTTGTATT ATGGAGGAAA ATCTATTGCT GAAACTTTAG AAGAAGGCGG AGACAAAATC
GTTAACAAAG CAATGCCTGT AACGATTGAA ACGCCTCAGT TTAAAAACAT TTCAATCAAA
AACATTACGA TCAAAGGTGC ACAGCAGGCA GTATTTTTAC AAGGTCTTCC TGAAATGAAT
CTTGAAAATA TCGAAATTTC AAACTTGACA GTTACGGCTG AAAAAGGATT TTCTATTATT
GACGCAAAAG GAATTAAAAT TACCAATGCG AAACTGGATA TCGAAAACAG CAATGTATTT
GAAGTTTACA ATGTAAAAAA TATGTCTTTA AAAGATGTTG AGTTTAATTC TACATCTGCT
AAAGCTGTAA ATATAAATGG TGAAGGAAAC GCAAATATAG AACTGGTTTC TTCTAAAAAA
TTAGATTTTT CAAAAACGAC TACTCTTGGA AATGATGTTC CAAAAGGAGC TGTAAAATTT
TAA
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| Protein sequence | MKTNLTNLFC TALTILAVSF SVPVLAQKAS DTYKDIEFKM AKIKEPVIPK NSVNIKDFGA
VNGGYVLNTK AFADAIDAVS KKGGGKVIIP PGIWLTGPII LKSNIELHAE RGALIKFSTD
KSLYPIIGTN FEGLNTWRCI SPIYGKNLEN IAFTGNGVWD GSGEVWRQVK KSKLTESQWK
KFVSSGGVLN KDKTSWYPSE TFMNASKGAD QNVRPDLKTK EEFETIHDFL RPVMVSIQNS
KRVLFDGPVF QNSPAWNIHP FMVEDLIVRN VTVRNPWYSQ NGDGLDVECC KNVLVENSSF
DVGDDAICIK SGKDKDGLER GIPCENIIVR NNIVYHGHGG VTVGSEMSGG VKNLHVSNCT
FMGTDVGLRF KSARGRGGVV ENIFISDVFM TDIPSQAISF NLYYGGKSIA ETLEEGGDKI
VNKAMPVTIE TPQFKNISIK NITIKGAQQA VFLQGLPEMN LENIEISNLT VTAEKGFSII
DAKGIKITNA KLDIENSNVF EVYNVKNMSL KDVEFNSTSA KAVNINGEGN ANIELVSSKK
LDFSKTTTLG NDVPKGAVKF
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