Gene Fjoh_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4096 
Symbol 
ID5090822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4911589 
End bp4912605 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content35% 
IMG OID644743515 
Productpectinesterase 
Protein accessionYP_001196423 
Protein GI146301832 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4677] Pectin methylesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.557872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA ACGAAATAAA TAAAAAACAT ATGAAATACA TTCTAACCTT ATTTTTAATA 
ACAACACTTT CAATATCAGC CCAAACGCTT GATAACAAAT TGACATTAAC CGTTGCTCAA
GACGGTTCTG GAGATTTTAA AACGATTCAG GAAGCGGTGA ATAATGTGAA AGATAATTCG
GAGAAACGTG TTGTAATCAC TATAAAACCA GGAAAGTATG TTGAGAAATT GGAAATTCCA
GTTTCAAAAC CCTTTATTAC TTTAAAAGGT CTTGACAGAA ATAAAACGAT TATTTCATTT
GATGATTATT CAGGAAAGCC GCTTCGTGAA CCAGATCCGT CGGGTAAAAA AGAATTTGGA
ACAGGAACTT CGTATTCTTT CATAATTAAA GGAAATGATT GTACGCTTGA AAATCTTACT
GTCGAAAATA CGGCGGGAAG AGTAGGACAG GCGGTTGCAC TTCACATTAA AGGCGATAGA
GTAATTGTGA AGAATTGCAA TCTTTTAGCA AATCAGGATA CCCTTTATTT ATCAGAAGGA
AACACCCGAA CTTATTTTGA AAACTGTTTC ATTAACGGTA CAACCGATTT TATCTTTGGC
GCTGCAACGG CTTATTTTTA TAAATGTACT ATTGAAAGTT TAGTCAATTC CTATATTACC
GCGGCTTCAA CTCCGCAAGG GCAAGCTTAT GGTTTTGTTT TTGTTGATTG CAAGCTTACT
GCAAAAGACA AATCGGTAGA CAAAGTATTT TTGGGAAGAC CATGGAGACC TTATGCACAA
ACTGTTTTCA TTAATACGGA TATTGGTTCG CACATTATTC CAGAAGGATG GAATGCCTGG
ATAGATACTC GTTTTCCGGA TAAAGATAAA ACAGCTTATT ACGCGGAATA CGGAAGTAAA
GGTGCAAGTA CAAAAAATAT CTCACAGCGA GTGTCATGGT CGTATCAATT AACTAAAGAT
GATATAAAAA AATACAATAA AGATTTAGTT TTGAATGGAT GGAATCCGGC CAAATAA
 
Protein sequence
MTKNEINKKH MKYILTLFLI TTLSISAQTL DNKLTLTVAQ DGSGDFKTIQ EAVNNVKDNS 
EKRVVITIKP GKYVEKLEIP VSKPFITLKG LDRNKTIISF DDYSGKPLRE PDPSGKKEFG
TGTSYSFIIK GNDCTLENLT VENTAGRVGQ AVALHIKGDR VIVKNCNLLA NQDTLYLSEG
NTRTYFENCF INGTTDFIFG AATAYFYKCT IESLVNSYIT AASTPQGQAY GFVFVDCKLT
AKDKSVDKVF LGRPWRPYAQ TVFINTDIGS HIIPEGWNAW IDTRFPDKDK TAYYAEYGSK
GASTKNISQR VSWSYQLTKD DIKKYNKDLV LNGWNPAK