Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4096 |
Symbol | |
ID | 5090822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4911589 |
End bp | 4912605 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743515 |
Product | pectinesterase |
Protein accession | YP_001196423 |
Protein GI | 146301832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4677] Pectin methylesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.557872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA ACGAAATAAA TAAAAAACAT ATGAAATACA TTCTAACCTT ATTTTTAATA ACAACACTTT CAATATCAGC CCAAACGCTT GATAACAAAT TGACATTAAC CGTTGCTCAA GACGGTTCTG GAGATTTTAA AACGATTCAG GAAGCGGTGA ATAATGTGAA AGATAATTCG GAGAAACGTG TTGTAATCAC TATAAAACCA GGAAAGTATG TTGAGAAATT GGAAATTCCA GTTTCAAAAC CCTTTATTAC TTTAAAAGGT CTTGACAGAA ATAAAACGAT TATTTCATTT GATGATTATT CAGGAAAGCC GCTTCGTGAA CCAGATCCGT CGGGTAAAAA AGAATTTGGA ACAGGAACTT CGTATTCTTT CATAATTAAA GGAAATGATT GTACGCTTGA AAATCTTACT GTCGAAAATA CGGCGGGAAG AGTAGGACAG GCGGTTGCAC TTCACATTAA AGGCGATAGA GTAATTGTGA AGAATTGCAA TCTTTTAGCA AATCAGGATA CCCTTTATTT ATCAGAAGGA AACACCCGAA CTTATTTTGA AAACTGTTTC ATTAACGGTA CAACCGATTT TATCTTTGGC GCTGCAACGG CTTATTTTTA TAAATGTACT ATTGAAAGTT TAGTCAATTC CTATATTACC GCGGCTTCAA CTCCGCAAGG GCAAGCTTAT GGTTTTGTTT TTGTTGATTG CAAGCTTACT GCAAAAGACA AATCGGTAGA CAAAGTATTT TTGGGAAGAC CATGGAGACC TTATGCACAA ACTGTTTTCA TTAATACGGA TATTGGTTCG CACATTATTC CAGAAGGATG GAATGCCTGG ATAGATACTC GTTTTCCGGA TAAAGATAAA ACAGCTTATT ACGCGGAATA CGGAAGTAAA GGTGCAAGTA CAAAAAATAT CTCACAGCGA GTGTCATGGT CGTATCAATT AACTAAAGAT GATATAAAAA AATACAATAA AGATTTAGTT TTGAATGGAT GGAATCCGGC CAAATAA
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Protein sequence | MTKNEINKKH MKYILTLFLI TTLSISAQTL DNKLTLTVAQ DGSGDFKTIQ EAVNNVKDNS EKRVVITIKP GKYVEKLEIP VSKPFITLKG LDRNKTIISF DDYSGKPLRE PDPSGKKEFG TGTSYSFIIK GNDCTLENLT VENTAGRVGQ AVALHIKGDR VIVKNCNLLA NQDTLYLSEG NTRTYFENCF INGTTDFIFG AATAYFYKCT IESLVNSYIT AASTPQGQAY GFVFVDCKLT AKDKSVDKVF LGRPWRPYAQ TVFINTDIGS HIIPEGWNAW IDTRFPDKDK TAYYAEYGSK GASTKNISQR VSWSYQLTKD DIKKYNKDLV LNGWNPAK
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