Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4095 |
Symbol | |
ID | 5090821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4907550 |
End bp | 4910921 |
Gene Length | 3372 bp |
Protein Length | 1123 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743514 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_001196422 |
Protein GI | 146301831 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAG CACTTTTAAA GAGATGTAGT TTTCTTTTGT TTGCACTGAT GAGTGTAATT ACTTATGCTC AAACCGCAGG CACTCCAATT AAGATTACAG GTACAGTGAC TGACAATTCA GGATTTCTTT TACCTGGTGT AAACGTAACT GAAAAATCGT CTAAAAACAC TGTTACTACA GATTACAATG GTAAGTACCA AATTACAGTG AAGCCAGGAG CAACATTGGT TTTTTCTTTT ATTGGTATGA AGAAAGTAGA AATTCCACTA GCAGGACGTA CTACTCTTAA TGCTAAATTA CAAGAAGATT CTAATGAGTT AAATGATATT GTGGTTGTGG CATATGGTAC TCAAAAGAAA CAAAAATTAA CAGGAGCGAT TGCTACAATA AAACCAGATG AAATTCAGGA TTTACCTGTT TCAAATTTAG GTGAATCTTT AAGAGGTTTA ACTCCGGGAT TAAATGTATC TGGTGGTTCT GGTCGTCCAG GGGTTGGAGC TGATGTCTCG ATACGTCAAT CTTTTGGTTT TTCTAAAGAT GGAAACACTA CTATTCCATT GATTGTAATT GATGATATGG TGCAGATTGA TCCAACAACA GGATTAGCTA CACTTGAAAC ATTTAATAGA TTAGATCCTT CAGAAATTGA AAGTATTACA GTTTTAAAAG ACGGTTCTGC TGCTATTTAT GGTTCTCGTG CTTCTCAAGG AGCTATCATT GTAAAAACTA AAAGAGGTCA AGATGGTAAA TTAAAGTTTA ACTATTACAG CCAGTCAGCA TTTAATGATG CTGTAAGTCA TAGTAAAGTA ATGAGTGCTT ATGACCACGG AATTTGGAAA AACAGATTTT TGAATTCTAA TCTTGATCCT GATAAATCTA AATATTTTTC TGCAGAAGAA TTAGAGCAGA TGAAAGGATT AGATTATAAT TGGTTGAAAA AAGCATGGAA ACCTGCTTTT CAACAAAGAC ACTCATTGAG TGCAAGCGGA GGAAATGATA AAGCGACATA CTTTGCAGGT ATAACTTATT TCGATCAGGG AGCAAATCTT GGTGAACAAG ATTATAAAAA ATGGAATTTC CGTACAGGTT TAACTGCTAA ACTGGCTAAG GATTTTGAAC TTTCTGCTGC AATTTCTGCA AATACAGTTG ATACTAGAAA ATCATTTTCT AAAGCTTCTG CAAACATCAG CGATTCAAGT TTTGGTGGAG CAGGAGGTGG AGAGCAGGCA GATTATGGAT ATTTACTGCA TATGCCAAGA TATATTCCAT GGTCTACTAC TGTAGAAGGT AAAGATTATT GGCTGTCTCC TATTGCTCGT ACAGATCGAA ACTTACAAAG TGCAAACGCA AATAATACTA TTGCAGGATG GAATTATTTT GCAGGATTAG ACAACGGTTA TCAAATTGAC GAAGAATTTT CATATAATGT GAATTTATCT TTGAATTATA AAGTTTCTTT TATTAAAGGT TTGTCACTTA AGGGAAGTTA TGCCAGAAGC CAGTCAAGCG CTAATTCTGA GCAAGTACAA TTACCATATG ATTTAGCCAG AATTAGAAAT TATGAAACAA TAGGAAATCA CCTGGCTGGC GCTGCAGATC CAACTATTTA CAATTCAGTA ACTAATCCAG CGGGAGATTA TCTTATAGAA ACTAATGTTA GAAACTCTAG AGTTTATTAT AATACAGATG TTGATAAGGT AATTCAGGCA AACTTTTTTG CAAACTATGC AAGAACTTTT GGAGATCACA GTGTTGATGC AATGTTTGGT ATTGAACGTT CAGAAGCTAA CTATAAAAAC ACCAGATTGG CTTACGAAGG TACTTCAAAA GATTATTTAG GAAGTAATAC AACTGCTGGT ACAATTACAA CAAACTCAAT AGCAAATAAA GGAGAATCTG GAACATTTTC TTACTTAGGA CGTGTAAACT ACAGCTACAA AGACAAATAT CTTTTGCAGT TACTTTTTAG AAGTGATGCT TCTACAAAAT TTGCACCAGA AAATTATTGG GGATTTTTCC CATCAGCTCA GTTAGGATGG GTTGTTTCAA ACGAAAAATG GTTTAAAGAA GCAGTTCCGG TTATTGATAA TTTAAAACTA CGTTATTCTA TTGGTAAAAC CGGAAAAGAT AACATTAAAC CATGGCGCTG GCTTGTTCTT TATGATGTTA TTGCTGATAA GGGTAATCAA TTTGGTTCAG CAGGAGGTAC ACTTGGAGGT GCAATTACGC CAAGAGCGAC ACCTAATCCA GATATTAAAT GGGATGCAAC AATCAAACAA AACTTTGGTA TTGATGTGAG CTTATTAAAA AATAGACTTC AGCTTACTAC AGATTTTTAC TATGATAAAT CTACAGATAT GCTGATTAGT TTAGCTGGTG AAGCAGGAAC TCCAATTTCT ATTGGTGGTG CTTTTGCAGA ACAAAATTAT GCAGATGTAA ATGCATGGGG AACAGAGATT AGCTTAACTT GGAAAGATAA AATTAAAAGA GATTTAAGCT ATAACGTAGG AATCAACTTT GGTTTCTCAG ATAATGAATA TAAAAAATAT CCAACAGCAC CATCTCAACA TCCATCGTTT AATACTATCG AAACAGGTTA TTCAAGCTTT ATGCCAGTAT GGGGATTCAG AACTTGGAAA GGAACTTCGA CAGGAGACGG TATTTTACGT ACAGATGAAG ATGTTACGAA CTACTGGAAT TATTTAGCGG CAAATGCAGC TGCAGTTGGC GGAGCTCCAA ATTATTTGGG TATTAATAAT GTTTCACAAA TGAGAAAAGG TATGCTGGCT TATGAAGATG TTGGAGGAGC ATATGATGGT ACAACAAAAA CTCAGGCACC TGCAGACGGA CAGATTGCAA GACAATTAGA TTATGTTAAA TTAGCTAACA GTAACAGAAC TTACGGATTC ACTTCGAATT TAGGATTAAA TTATAAATCT TTTTATTTTA GAACTCAGAT AGCTACTACA TGGGGAGGGT ATAACTCAAT CGACTTAGTA CAACAAGGGA CTGGATCTAC TCAAAATGAC TGGGGACATG AAGTTTTTTG GAAAGATATG TATGATGCTA CTGATAATCC AAACGGAAAA TATCCTAATA TGGGACAACA AGGAACTGCT TTTGCTCCAT CAGATTTTTG GGAACTTAGC AACTTTAGAT GTGTAGTTAG AAATTTAACT GTAGGATTTG AATTGCCTCA AGAGCCTCTT AAAACAATTG GTGTACAAAG AGTTACTTTA GGAGTTACAG GAAATAACCT TTGGGATTTA TATAATCCAT ATCCAAACCA TTATCGTAAT ATGTACGATA CATCTTCAGC AAGATATCCT ACACTTAGAA CATGGTCAGT TAATTTGAAT GTAACATTCT AA
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Protein sequence | MKQALLKRCS FLLFALMSVI TYAQTAGTPI KITGTVTDNS GFLLPGVNVT EKSSKNTVTT DYNGKYQITV KPGATLVFSF IGMKKVEIPL AGRTTLNAKL QEDSNELNDI VVVAYGTQKK QKLTGAIATI KPDEIQDLPV SNLGESLRGL TPGLNVSGGS GRPGVGADVS IRQSFGFSKD GNTTIPLIVI DDMVQIDPTT GLATLETFNR LDPSEIESIT VLKDGSAAIY GSRASQGAII VKTKRGQDGK LKFNYYSQSA FNDAVSHSKV MSAYDHGIWK NRFLNSNLDP DKSKYFSAEE LEQMKGLDYN WLKKAWKPAF QQRHSLSASG GNDKATYFAG ITYFDQGANL GEQDYKKWNF RTGLTAKLAK DFELSAAISA NTVDTRKSFS KASANISDSS FGGAGGGEQA DYGYLLHMPR YIPWSTTVEG KDYWLSPIAR TDRNLQSANA NNTIAGWNYF AGLDNGYQID EEFSYNVNLS LNYKVSFIKG LSLKGSYARS QSSANSEQVQ LPYDLARIRN YETIGNHLAG AADPTIYNSV TNPAGDYLIE TNVRNSRVYY NTDVDKVIQA NFFANYARTF GDHSVDAMFG IERSEANYKN TRLAYEGTSK DYLGSNTTAG TITTNSIANK GESGTFSYLG RVNYSYKDKY LLQLLFRSDA STKFAPENYW GFFPSAQLGW VVSNEKWFKE AVPVIDNLKL RYSIGKTGKD NIKPWRWLVL YDVIADKGNQ FGSAGGTLGG AITPRATPNP DIKWDATIKQ NFGIDVSLLK NRLQLTTDFY YDKSTDMLIS LAGEAGTPIS IGGAFAEQNY ADVNAWGTEI SLTWKDKIKR DLSYNVGINF GFSDNEYKKY PTAPSQHPSF NTIETGYSSF MPVWGFRTWK GTSTGDGILR TDEDVTNYWN YLAANAAAVG GAPNYLGINN VSQMRKGMLA YEDVGGAYDG TTKTQAPADG QIARQLDYVK LANSNRTYGF TSNLGLNYKS FYFRTQIATT WGGYNSIDLV QQGTGSTQND WGHEVFWKDM YDATDNPNGK YPNMGQQGTA FAPSDFWELS NFRCVVRNLT VGFELPQEPL KTIGVQRVTL GVTGNNLWDL YNPYPNHYRN MYDTSSARYP TLRTWSVNLN VTF
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