Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4078 |
Symbol | |
ID | 5090804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4875957 |
End bp | 4877102 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644743497 |
Product | BNR repeat-containing glycosyl hydrolase |
Protein accession | YP_001196405 |
Protein GI | 146301814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4692] Predicted neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAA CAAAATTAGC ATTTGTCTTG TTTGGACTTT TCCTTTTAGG AAGTTGTAAA TCGGCTTTAG AGAAAAAGAC TTGGAAAGAA GGAATTTTAG TAGATGAATT TATTTATGAT AAAGCACCTT ATCCGTCTTG CCACGCCGTT ACAATTGTCG AAGCTACAAA TGGTGATTTA GTTGCCTCAT GGTTTGGTGG AACTCACGAG AGACATCCAG ATGTTTGCAT TTATGTGGCC ATTAAACCAA AAGGAAGTGA TAAATGGGGA GAAGGTGTAA AAGTTGCCGA TGGTGTGATG AAAGAAGGGC CGAGATTACC AACTTGGAAC CCAGTTTTAT ATCAAATTCC GGGAGGCGAT TTAATGTTAT TCTACAAAAT AGGTCCAAAA CCATCGGAAT GGTGGGGTGT TATCAGAACT TCATCTGATG GCGGAAAAAC TTGGTCCGAG GCTCAGAAAA TGCCAGACGG TTTCTTAGGC CCAATCAAAA ACAAACCAGT TTTATTAAGC AACGGAACTT TATTATGTCC GTCAAGCATT GAAGGCGACG GCTGGAGACT TCGTATGGAA TCTACTCCAG ATTTCGGAAA GACTTGGGTA ATGGGCGATA CGCTTCCAAG AGGAAAACAA AAAATCAATG CGATTCAACC AAGTATTTTA TTCCATAAAG ACGGAAGTAT TCAGGCTATT GGAAGAACTA GAAACAGAGC TATTTTCAGC ACATTCTCAA AAGATAACGG AAAAACTTGG TCGGATGTAG AGTTAATCGG ACTTCCAAAT AACAATTCAG GAACTGATGC TGTAACGTTA AGAGATGGTA GACATTTATT AGTTTACAAT CACGTTCTTC CTCCAGGAAA AGAAGCAAAA GGGCCAAGAA CGCCTTTGAA TGTTTCGGTT TCTAAAGACG GAATTCATTG GAACGCTGCT TTAGTTTTAG AAGATTCAAA AATCAGCCAA TATTCTTATC CTTCAATGAT TCAAAGTTCA GACGGAATGG TGCATATTGT ATATACTTGG AGAAGAGAAA AACTGAAATA TGTAAAAGTT GATCCAAGTA AATTAGTGGC GCTTCCAATT AAAAACGGAA TCTGGCCAGG CGAAGAAGGA AAAGTAGTTA CAGCGGTAAA AGCCGAAGAA GAGTAA
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Protein sequence | MKITKLAFVL FGLFLLGSCK SALEKKTWKE GILVDEFIYD KAPYPSCHAV TIVEATNGDL VASWFGGTHE RHPDVCIYVA IKPKGSDKWG EGVKVADGVM KEGPRLPTWN PVLYQIPGGD LMLFYKIGPK PSEWWGVIRT SSDGGKTWSE AQKMPDGFLG PIKNKPVLLS NGTLLCPSSI EGDGWRLRME STPDFGKTWV MGDTLPRGKQ KINAIQPSIL FHKDGSIQAI GRTRNRAIFS TFSKDNGKTW SDVELIGLPN NNSGTDAVTL RDGRHLLVYN HVLPPGKEAK GPRTPLNVSV SKDGIHWNAA LVLEDSKISQ YSYPSMIQSS DGMVHIVYTW RREKLKYVKV DPSKLVALPI KNGIWPGEEG KVVTAVKAEE E
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