Gene Fjoh_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4078 
Symbol 
ID5090804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4875957 
End bp4877102 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content39% 
IMG OID644743497 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_001196405 
Protein GI146301814 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4692] Predicted neuraminidase (sialidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA CAAAATTAGC ATTTGTCTTG TTTGGACTTT TCCTTTTAGG AAGTTGTAAA 
TCGGCTTTAG AGAAAAAGAC TTGGAAAGAA GGAATTTTAG TAGATGAATT TATTTATGAT
AAAGCACCTT ATCCGTCTTG CCACGCCGTT ACAATTGTCG AAGCTACAAA TGGTGATTTA
GTTGCCTCAT GGTTTGGTGG AACTCACGAG AGACATCCAG ATGTTTGCAT TTATGTGGCC
ATTAAACCAA AAGGAAGTGA TAAATGGGGA GAAGGTGTAA AAGTTGCCGA TGGTGTGATG
AAAGAAGGGC CGAGATTACC AACTTGGAAC CCAGTTTTAT ATCAAATTCC GGGAGGCGAT
TTAATGTTAT TCTACAAAAT AGGTCCAAAA CCATCGGAAT GGTGGGGTGT TATCAGAACT
TCATCTGATG GCGGAAAAAC TTGGTCCGAG GCTCAGAAAA TGCCAGACGG TTTCTTAGGC
CCAATCAAAA ACAAACCAGT TTTATTAAGC AACGGAACTT TATTATGTCC GTCAAGCATT
GAAGGCGACG GCTGGAGACT TCGTATGGAA TCTACTCCAG ATTTCGGAAA GACTTGGGTA
ATGGGCGATA CGCTTCCAAG AGGAAAACAA AAAATCAATG CGATTCAACC AAGTATTTTA
TTCCATAAAG ACGGAAGTAT TCAGGCTATT GGAAGAACTA GAAACAGAGC TATTTTCAGC
ACATTCTCAA AAGATAACGG AAAAACTTGG TCGGATGTAG AGTTAATCGG ACTTCCAAAT
AACAATTCAG GAACTGATGC TGTAACGTTA AGAGATGGTA GACATTTATT AGTTTACAAT
CACGTTCTTC CTCCAGGAAA AGAAGCAAAA GGGCCAAGAA CGCCTTTGAA TGTTTCGGTT
TCTAAAGACG GAATTCATTG GAACGCTGCT TTAGTTTTAG AAGATTCAAA AATCAGCCAA
TATTCTTATC CTTCAATGAT TCAAAGTTCA GACGGAATGG TGCATATTGT ATATACTTGG
AGAAGAGAAA AACTGAAATA TGTAAAAGTT GATCCAAGTA AATTAGTGGC GCTTCCAATT
AAAAACGGAA TCTGGCCAGG CGAAGAAGGA AAAGTAGTTA CAGCGGTAAA AGCCGAAGAA
GAGTAA
 
Protein sequence
MKITKLAFVL FGLFLLGSCK SALEKKTWKE GILVDEFIYD KAPYPSCHAV TIVEATNGDL 
VASWFGGTHE RHPDVCIYVA IKPKGSDKWG EGVKVADGVM KEGPRLPTWN PVLYQIPGGD
LMLFYKIGPK PSEWWGVIRT SSDGGKTWSE AQKMPDGFLG PIKNKPVLLS NGTLLCPSSI
EGDGWRLRME STPDFGKTWV MGDTLPRGKQ KINAIQPSIL FHKDGSIQAI GRTRNRAIFS
TFSKDNGKTW SDVELIGLPN NNSGTDAVTL RDGRHLLVYN HVLPPGKEAK GPRTPLNVSV
SKDGIHWNAA LVLEDSKISQ YSYPSMIQSS DGMVHIVYTW RREKLKYVKV DPSKLVALPI
KNGIWPGEEG KVVTAVKAEE E