Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4074 |
Symbol | |
ID | 5090800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4865726 |
End bp | 4868146 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743493 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001196401 |
Protein GI | 146301810 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.275726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAC ATAAAAACAT ATTTCAAAAA ATTACAATTG CCTTATTGTT TTCAGTATCC ATTTTTGCAC AAAAACAAGC CAGAATTGTC GAAGATTTCA ACAAAAATTG GAACTTCAAA TTAGGAGATT ATCCAGAAGC AATAAATGCC AATTTCACTG CATCAGATTG GAGAACGCTT CAATTACCAC ACGATTGGAG TATTGAAGGC GCTTTTGATA AGGATGCTAA AACCAAGCAA GCACAAGGAT TTTTACCTGC TGGAAAAGGC TGGTATCGCA AAGTATTTAC AGTTCCGGCG AACTGGAAAA ACAAAACTAT TTCAATTGAA TTTGACGGTG TTTTTAAGAA CAGTGAAGTT TTCATAAATG GAAAATCATT AGGAGTTCGC CCAAATGGTT ATATTTCTTT TGGATATGAC TTGACGCAAT ATTTAAACTT TGGAAAATCA AATACAATTG CCGTAAAAGT CGATAACGAT GCACAACCGA ATTCTAGATG GTACACAGGT TCTGGGATTT ACAGAAATGT ACGTTTAGTT GCCAGTGAAA AACTGCACGT TGGAAAATGG GGAACTTTTG TAACAACGCC AGAAGTTTCA GCAGAAAAAT CAAAGATACA TCTAGAAGTT ACGATTGATA ATGATAATGC TTCTGCGAAA GAATTTAAAC TGGTTACTTC GATTATAAAT GCAGAAAATA AAGAAGTTGT CAATTTTACA TCAACAGAAA AAATTGGTGC TAAAACCTCA GAAAAAAAGA TTCATGATTT GGTTTTAAAT CAGCCGAAAT TATGGAGTAC AGAAAATCCG TATTTGTATA AAGTCATTAC AAAGGTTTAC GAGAAATCGA AATTGGTTGA TAATTATGAA ACTCCACTTG GGTTTAGATA TTTTAATTTT GATTCAGAAA AAGGATTTTC TTTAAATGGT GTTCCAACCA AAATTTACGG CGTTTGTTTG CATCACGATA ATGGTGCTTT GGGTGCGGTA GAAAATATTC ATGCCGTAAG AAGAAAGCTG GCTTTAATGA AAGAAATGGG AGCAAACGCT ATCAGAATGT CTCATAATCC ACATTCGTTG GAAATGATGC AATTGTGCGA CGAAATGGGG TTTATCGTTC AAGATGAAGC TTTTGATGTT TGGAAAAAGA AAAAAGTAAC CAACGATTAT CATAAAGATT GGGATGCTTG GCACAAACAA GATTTAGAAG ATTTTATTAA AAGAGATCGT AATCATCCAT CGGTTATGAT GTGGAGTATT GGTAACGAAA TTAGAGAACA GTTTGATTCG ACAGGAATTG CGATTACCAG AGAATTGGCT AAAATTGTAA AATCTTTAGA TAAAACTCGT CCTGTAACTT CGGCTTTGAC AGAAAATGTA ATTGAGAAAA ACTTCATTTA TCAGTCAGGA GCTTTGGATC TCTTAGGATT CAATTACAAA CATGAAGATT ATAAAGATTT TCCAACGAAA TTTAAAGGAC AAAAAATATT GGCTTCAGAA AGTGTTTCGG CTTTAGAAAC ACGTGGGCAT TATGATTTTC CTGACGGAAT TAAAGCCTGG CCAACAAAAC ACGGAGCTCC GTTTGACGGA AATGCCGATT GGACGGTTTC GGCTTATGAT CAGGTAAAAT CGTATTGGGG CGCAACGCAC GAAGAAAACT GGAAAACGAT TAAAAGTCAG GATTTCATGG CGGGAACTTT TATCTGGACA GGTTTTGATT ATATCGGAGA ACCAGATCCG TATCCGTTTC CTGCAAGAAG TTCGTATTTC GGAATCGTTG ATTTAGCCGG ACTTCCAAAA GATGTGTATT ATATGTATCA AAGTGAATGG TCGAACAAAA CGGTTCTGCA TATTTTACCG CATTGGAACT GGAAAAAAGA TCAAGAAGTC GAAGTTTGGG CGTATTACAA TAATGCTGAT GAAGTAGAAT TATTCTTAAA CGGAAAGTCG TTAGGAAAGA AAGCAAAACA AAATGATGAT TTGCATATTT CTTGGAGAGT AAAATTTGAG CCAGGAACAT TAAAAGCGGT TTCGAGAAAG TACGGAAAGG TGGTTTTAGA AAAAGAAATA AAGACGGCTG GAGAAGCTTC TAAAATCGAT TTAAAAGCAG ATAAAACTTC AATCAAAAAC GATACTTACG ATTTGGTTTA TGTAACTGTT TCTATGACTG ATAAAGATGG AAATTTAGTC CCAAACGCAA TGGATTTAGT CAATTTTGAA GTTTCTGGCG GAGGAAAATT AGTTGGAGTT GATAATGGTT ATCAGGCTAA TTTGGATTCT TTTAAAGCCA ATTCCTGTAA ATTGTTTAAT GGAAAATGTG TTGCGATTAT TCAGTCGAAT GGGAAGAAAG AAAATATTCA GCTGAAAGCG ATGGCAGGAA ATGGAATTCC GTTTTCAGCA ATTCAGATAA ACGTTAATTA A
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Protein sequence | MIKHKNIFQK ITIALLFSVS IFAQKQARIV EDFNKNWNFK LGDYPEAINA NFTASDWRTL QLPHDWSIEG AFDKDAKTKQ AQGFLPAGKG WYRKVFTVPA NWKNKTISIE FDGVFKNSEV FINGKSLGVR PNGYISFGYD LTQYLNFGKS NTIAVKVDND AQPNSRWYTG SGIYRNVRLV ASEKLHVGKW GTFVTTPEVS AEKSKIHLEV TIDNDNASAK EFKLVTSIIN AENKEVVNFT STEKIGAKTS EKKIHDLVLN QPKLWSTENP YLYKVITKVY EKSKLVDNYE TPLGFRYFNF DSEKGFSLNG VPTKIYGVCL HHDNGALGAV ENIHAVRRKL ALMKEMGANA IRMSHNPHSL EMMQLCDEMG FIVQDEAFDV WKKKKVTNDY HKDWDAWHKQ DLEDFIKRDR NHPSVMMWSI GNEIREQFDS TGIAITRELA KIVKSLDKTR PVTSALTENV IEKNFIYQSG ALDLLGFNYK HEDYKDFPTK FKGQKILASE SVSALETRGH YDFPDGIKAW PTKHGAPFDG NADWTVSAYD QVKSYWGATH EENWKTIKSQ DFMAGTFIWT GFDYIGEPDP YPFPARSSYF GIVDLAGLPK DVYYMYQSEW SNKTVLHILP HWNWKKDQEV EVWAYYNNAD EVELFLNGKS LGKKAKQNDD LHISWRVKFE PGTLKAVSRK YGKVVLEKEI KTAGEASKID LKADKTSIKN DTYDLVYVTV SMTDKDGNLV PNAMDLVNFE VSGGGKLVGV DNGYQANLDS FKANSCKLFN GKCVAIIQSN GKKENIQLKA MAGNGIPFSA IQINVN
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