Gene Fjoh_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4048 
Symbol 
ID5091541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4828243 
End bp4828782 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID644743467 
Productphage tail collar domain-containing protein 
Protein accessionYP_001196375 
Protein GI146301784 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA CAATATCCGA AATTCGATTA TATGCACCTA ACTTTGCTCC AAAATATTGG 
GCTTACTGTG CGGGTCAACT ACTAAGTATA AATACAAACC AAGCCTTATT TAGTCTTTTA
GGCACTACAT ACGGCGGTAA TGGTACTACT AATTTTGCAT TACCTGATTT TAGGGGAAGA
ACTGCCGTTG GAACTGGTAC TCCTCAAGGA GTAGCTCAAT TTGTATTGGG ACAGGTAAGC
GGAACTAATA CAGTAACTGC ACTGCTTGGA AATCTTCCGG CACACACTCA TGCAGCCACA
GGAACATTTG CACTAAAAGC ATATGCTGAT ACAGGAGATA CTGCCGCACC GCAAAATGCT
TATCTGGCTT CGGTTTCAAA TCTTTACACC AGCCAAAACG CAGATGGTGC TTTAAAACCA
ATTACACCAA CAGTAACTGT AGGAACAACT GGAAGCAGCC AGCCAATTTC AATTCAGCAG
CCTTATTTAG GTATTAATTA TATAATATGC CTTCAGGGAA TTTTTCCTTC AAGGAATTAA
 
Protein sequence
MEGTISEIRL YAPNFAPKYW AYCAGQLLSI NTNQALFSLL GTTYGGNGTT NFALPDFRGR 
TAVGTGTPQG VAQFVLGQVS GTNTVTALLG NLPAHTHAAT GTFALKAYAD TGDTAAPQNA
YLASVSNLYT SQNADGALKP ITPTVTVGTT GSSQPISIQQ PYLGINYIIC LQGIFPSRN