Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4042 |
Symbol | |
ID | 5091535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4822581 |
End bp | 4823597 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743461 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001196369 |
Protein GI | 146301778 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAGAA TTTCAATTAA AGATGTGGCA TTAAAAGCAG GCGTATCTAT CGCCTCAGTA TCTTATGTAC TTAACAATAA GATTGACAGC CGTATTCCGC AGGAAACAAT TGACAAGGTA AAACACGCTG CCGAAGAATT AAATTACCGT CCTAACAATA TTGCAAAAAG CTTAAAAACA CAGCGAACCC ATATAATTGG TCTTGTTGTC GCTGATATTG CAAATCCTTA CTTTTCTCAG TTAGCCCGAA TTATTGAAGA TGAAGCCAAC AAACTGGGTT ATACCCTTTT AATTGGAAGC TCTGATGAAA ATGCCGAAAA ATTTGAAGCG CTTATCAATA TGTTTGCCGA CCGTCAGGCC GATGGATTAA TTATTGCTCC TGTTGAAAAC AGTGAAAAAT GTTTGTTGAA ACTGCAAAAG CAAAAGATTC CTTTTGTATT AATTGACCGT TATTTATCTG GTGTTGAAGC AGACAGCATA CAAATTAATA ACTACGATAT AAGCCAAAAA GTTACAGAAC ACCTTATAAA CGGCGGTTAT AAAAACACTC TTCTTGTTGC TTATAAAACA CAGTTGCAGC ACTTATTACA GCGAACTCAG GCATTTTTAA ATACGCTCGA AAAACATCAA ATACAAAACA GTCAAGTGCT TTTAGCAGAC AAAGACTATA TTGACAGAGA CATTAATACC GGCTTAGAAA ATATGCTGCA AAATGCAGTA AAACCAGATG CCATCTTTTT TACTAGTAAT AAACTGGCAG TTTCCGGACT CAAAAAACTT ACACAACTTG GCATAAATAT TCCGCAGGAT ATTGCAGTTG CTGCTTTTGA TGAAACTGAA GCTTATGAGC TTTTTCCGGT TCCGCTAACG TATGTAAAAC AGCCGCTTTC TGCCATTGGG ACAACCGCTG TAAAAATGCT TAACGAAAAA ATCAATATCA AAAATCTGCC TTTGCAGAAT GTAACTTTAC ATGCTGAACT TCATATAGGT CAGTCTACAA AATCTAAACA CATCTAA
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Protein sequence | MKRISIKDVA LKAGVSIASV SYVLNNKIDS RIPQETIDKV KHAAEELNYR PNNIAKSLKT QRTHIIGLVV ADIANPYFSQ LARIIEDEAN KLGYTLLIGS SDENAEKFEA LINMFADRQA DGLIIAPVEN SEKCLLKLQK QKIPFVLIDR YLSGVEADSI QINNYDISQK VTEHLINGGY KNTLLVAYKT QLQHLLQRTQ AFLNTLEKHQ IQNSQVLLAD KDYIDRDINT GLENMLQNAV KPDAIFFTSN KLAVSGLKKL TQLGINIPQD IAVAAFDETE AYELFPVPLT YVKQPLSAIG TTAVKMLNEK INIKNLPLQN VTLHAELHIG QSTKSKHI
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