Gene Fjoh_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4042 
Symbol 
ID5091535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4822581 
End bp4823597 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content36% 
IMG OID644743461 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001196369 
Protein GI146301778 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGAA TTTCAATTAA AGATGTGGCA TTAAAAGCAG GCGTATCTAT CGCCTCAGTA 
TCTTATGTAC TTAACAATAA GATTGACAGC CGTATTCCGC AGGAAACAAT TGACAAGGTA
AAACACGCTG CCGAAGAATT AAATTACCGT CCTAACAATA TTGCAAAAAG CTTAAAAACA
CAGCGAACCC ATATAATTGG TCTTGTTGTC GCTGATATTG CAAATCCTTA CTTTTCTCAG
TTAGCCCGAA TTATTGAAGA TGAAGCCAAC AAACTGGGTT ATACCCTTTT AATTGGAAGC
TCTGATGAAA ATGCCGAAAA ATTTGAAGCG CTTATCAATA TGTTTGCCGA CCGTCAGGCC
GATGGATTAA TTATTGCTCC TGTTGAAAAC AGTGAAAAAT GTTTGTTGAA ACTGCAAAAG
CAAAAGATTC CTTTTGTATT AATTGACCGT TATTTATCTG GTGTTGAAGC AGACAGCATA
CAAATTAATA ACTACGATAT AAGCCAAAAA GTTACAGAAC ACCTTATAAA CGGCGGTTAT
AAAAACACTC TTCTTGTTGC TTATAAAACA CAGTTGCAGC ACTTATTACA GCGAACTCAG
GCATTTTTAA ATACGCTCGA AAAACATCAA ATACAAAACA GTCAAGTGCT TTTAGCAGAC
AAAGACTATA TTGACAGAGA CATTAATACC GGCTTAGAAA ATATGCTGCA AAATGCAGTA
AAACCAGATG CCATCTTTTT TACTAGTAAT AAACTGGCAG TTTCCGGACT CAAAAAACTT
ACACAACTTG GCATAAATAT TCCGCAGGAT ATTGCAGTTG CTGCTTTTGA TGAAACTGAA
GCTTATGAGC TTTTTCCGGT TCCGCTAACG TATGTAAAAC AGCCGCTTTC TGCCATTGGG
ACAACCGCTG TAAAAATGCT TAACGAAAAA ATCAATATCA AAAATCTGCC TTTGCAGAAT
GTAACTTTAC ATGCTGAACT TCATATAGGT CAGTCTACAA AATCTAAACA CATCTAA
 
Protein sequence
MKRISIKDVA LKAGVSIASV SYVLNNKIDS RIPQETIDKV KHAAEELNYR PNNIAKSLKT 
QRTHIIGLVV ADIANPYFSQ LARIIEDEAN KLGYTLLIGS SDENAEKFEA LINMFADRQA
DGLIIAPVEN SEKCLLKLQK QKIPFVLIDR YLSGVEADSI QINNYDISQK VTEHLINGGY
KNTLLVAYKT QLQHLLQRTQ AFLNTLEKHQ IQNSQVLLAD KDYIDRDINT GLENMLQNAV
KPDAIFFTSN KLAVSGLKKL TQLGINIPQD IAVAAFDETE AYELFPVPLT YVKQPLSAIG
TTAVKMLNEK INIKNLPLQN VTLHAELHIG QSTKSKHI