Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4006 |
Symbol | |
ID | 5091500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4788706 |
End bp | 4789119 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743427 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001196335 |
Protein GI | 146301744 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.244405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTA AAAAACAAAA AACATGGGTA ATAATCGCCA TTATCATTTT AGGAATAATC GCTTTTTTAA TCCCGAATCA AATCGCAGCA CAAACCGGAA TAAAACGCAC TGATTTACAA AAACACAATT TAAGCATTCC GGGAAGAGAA ACCGTTCAGG CCAAAATTGA TTTTGACGTA CATACCGCTT TCGGAAAACA TTCACATCCG GGAGAAGAAA TCATTTACGT ATTAGAAGGT TCACTTGAAT ATGAAGTGGA AGGCCAGGCG CCCATAACCT TAAAAGCAGG AGAAGTACTT TTTATTCCGG CTGGAGTAAT TCACTCAGCT AAAAATAATA CGAACTTAAA AGCATCAGAA CTGGCAACAT ATATAGTAGA AAAAGGAAAA CCGGTTTTGG TTATGAAAAA GTAG
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Protein sequence | METKKQKTWV IIAIIILGII AFLIPNQIAA QTGIKRTDLQ KHNLSIPGRE TVQAKIDFDV HTAFGKHSHP GEEIIYVLEG SLEYEVEGQA PITLKAGEVL FIPAGVIHSA KNNTNLKASE LATYIVEKGK PVLVMKK
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