Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4002 |
Symbol | |
ID | 5091496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4784608 |
End bp | 4785624 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743423 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001196331 |
Protein GI | 146301740 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG CAAAACGTTT TCAGGTTTCG CTCAAAGTTA TTTGGGGAAG TTCTATTGCG CTGGCAGTTA TGGCTTCGAT ACCTAAATTA TTTGATGCCG ATTCTACACC TGGAGACCTT ATTATAAATT CTTCGATTAC ACTGCTGTTT TCTCTTTTTA TATGGTATTA CAACATTTAC AGCTTACCTA AATTCTCATC ACAGCGCACG AACAAAAGTC TGTTTAACTG GAAACTTTTG CTTAGTGTTG TACTGGGAAT TTTGCTGATG GTGATTCTCG TAATCGCACA TCAGGAACTT TTTCAGGTTT CAAAAATGGA TGCGCCTATT ATGTTTGAAC TCCGCGGGGT TTTAATCAAT TTAATTGTCT ATATGTTCCT GCATTTGCTT TTTCAAAATT ATCAAACCCA GCAAATGGGA GTAGAACTGG AGCGTACCAA AGCTGTACAT CTTGGAGCGC AGTATGAACT TTTGAAACAG CAGGTCAATC CGCATTTTTT GTTTAACAGT CTAAATACTT TAAAATCGAT GGTTGATATG CAGGATCCTC AGAGTTCTGA TTTTATCCTG AAATTATCTG ATTTTTATCG ATTTACCCTA GAAAGCCGAA AAATGGATTT GATTCCGTTA AAAGAAGAAT TGCAGATTCT GGATTCTTAT GTATATCTGC TCAAAGCCCG TTTTGAAGAT GGATTTGAAG TTATAAAAGA AATTGATGCC CAGCAGTACG ATTGTGCAAT TCCGCCTTTT TCACTACAGT TATTGATCGA AAATTGTATC AAACACAATA TCGTTTCGCT TGATAAACCT TTGAAAATTA AATTATATAC CGAAAATGAT TTTCTGGTAA TCGAAAACCC AATCCAGCTG AAACGAGGCA CTTTGTCAAC AGGCGTTGGA CTGAACAATA TCAATCAGCG ATTCCTTCAT TTGGTGAACA AAGAAATTGA AATTGACAAA ACCGAAACCC ATTTTAAAGT TAAAATACCA CTAATTTATG ACTATCATAA TAATTGA
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Protein sequence | MEKAKRFQVS LKVIWGSSIA LAVMASIPKL FDADSTPGDL IINSSITLLF SLFIWYYNIY SLPKFSSQRT NKSLFNWKLL LSVVLGILLM VILVIAHQEL FQVSKMDAPI MFELRGVLIN LIVYMFLHLL FQNYQTQQMG VELERTKAVH LGAQYELLKQ QVNPHFLFNS LNTLKSMVDM QDPQSSDFIL KLSDFYRFTL ESRKMDLIPL KEELQILDSY VYLLKARFED GFEVIKEIDA QQYDCAIPPF SLQLLIENCI KHNIVSLDKP LKIKLYTEND FLVIENPIQL KRGTLSTGVG LNNINQRFLH LVNKEIEIDK TETHFKVKIP LIYDYHNN
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