Gene Fjoh_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3997 
Symbol 
ID5091491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4779982 
End bp4780632 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content33% 
IMG OID644743418 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001196326 
Protein GI146301735 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAATA GACAATCGAT AAGTTCATTT GATTTTATAA CTTTACAAAT GACTTTCAAA 
TCAAAAAATC CATTTAAAAT GCAGGCTAAA ACACTTTTAC AAGAGCATAT CGCTAAAACA
GCTTCGCTTA CTCAAGAAGA ATTTGATTAT TTCTTTTCGC ATTTCAAATC TTTGACTTTT
AAAAAAGGAC AAACGATTAT CAGCGAAGGC GATAAAGTCG ATTGTGAATA TTTTGTGATT
TCAGGGTGTT TGAAAGCTTT CTTTATAAAT GATGAAATCA AAATGTACAT TCTTCAGTTT
GCCATGCCAA CCTGGTGGAC ATCTGATTAT AATGCACTTT ATAACCAAAC TCCCGCACAA
ATAAATGTAG ATTGTATTAC AGATGCCGAA GTACTGTGTT TATCCAGCGC CGATCGCGAA
AAACTCTGTG CAGAATTTCA TCAAATAGAA CATTTCTTTC GCTGGAGAAC CAATAAAGGG
TATATTGCTT CTCAAAAACG CCTTCTATCA TTTATGAATA ATAATGTAAA AACGCGTTAT
GAAGAACTTT TGGCTTTATA TCCGCAATTG TACAATTTAG TGCCAAAACA TTTAATTGCT
TCTTATTTAG GAGTTTCCAG AGAAACTTTA AGCCGGCTTC ATAATTCTTA G
 
Protein sequence
MRNRQSISSF DFITLQMTFK SKNPFKMQAK TLLQEHIAKT ASLTQEEFDY FFSHFKSLTF 
KKGQTIISEG DKVDCEYFVI SGCLKAFFIN DEIKMYILQF AMPTWWTSDY NALYNQTPAQ
INVDCITDAE VLCLSSADRE KLCAEFHQIE HFFRWRTNKG YIASQKRLLS FMNNNVKTRY
EELLALYPQL YNLVPKHLIA SYLGVSRETL SRLHNS